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MK448973.1__QBX30052.1__Javan522_0007__00007
Bact-VirMK448973.1__QBX30052.1__Javan522_0007__00007
Identity
- Accession:
- MK448973 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-58
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.63 | 43.0 | 4.04e-01 | 96.5% | 55.3% |
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.60 | 45.0 | 3.72e-01 | 84.2% | 44.6% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.59 | 40.0 | 3.42e-01 | 98.2% | 41.8% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 46.0 | 4.22e-01 | 93.0% | 65.4% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.54 | 45.0 | 4.25e-01 | 100.0% | 86.5% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 41.0 | 3.44e-01 | 98.2% | 64.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4615565 | 101.1.1.249 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SGIII | 0.63 | 49.0 | 4.33e-01 | 94.7% | 57.6% |
| 4473504 | 304.136.1.3 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SGIII | 0.63 | 49.0 | 4.23e-01 | 94.7% | 54.4% |
| 5065070 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.59 | 45.0 | 4.30e-01 | 94.7% | 70.8% |
| 4984709 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.56 | 41.0 | 3.84e-01 | 96.5% | 61.3% |
| 4993232 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.54 | 48.0 | 4.63e-01 | 100.0% | 93.8% |
| 5025683 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.53 | 40.0 | 4.16e-01 | 87.7% | 83.6% |