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MK448990.1__QBX30940.1__Javan584_0002__00002
Bact-VirMK448990.1__QBX30940.1__Javan584_0002__00002
Identity
- Accession:
- MK448990 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-65
Domain cluster:
rep: MK448971.1__QBX29987.1__Javan52_0068__00002__D4-58
D2
high
residues 161-261
Domain cluster:
rep: MK448585.1__QBX12008.1__JavanS625_0002__00014__D2-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08797.17 best | HIRAN | 43.5 | 3.20e-11 | 100.0% | 87.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2yA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.86 | 77.0 | 7.66e-01 | 100.0% | 93.2% |
| 2ns6A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.63 | 37.0 | 3.05e-01 | 100.0% | 32.2% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.63 | 33.0 | 2.49e-01 | 100.0% | 20.2% |
| 3gkuA01 | 3.30.30.80 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › probable RNA-binding protein from clostridium symbiosum atcc 14940 | 0.57 | 29.0 | 3.76e-01 | 100.0% | 92.5% |
| 2cy9B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 3.81e-01 | 77.2% | 68.2% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 41.0 | 3.62e-01 | 75.2% | 68.1% |
| 2cwzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 41.0 | 3.72e-01 | 79.2% | 75.2% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.97e-01 | 80.2% | 90.5% |
| 2dhjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.77e-01 | 79.2% | 85.6% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 33.0 | 2.66e-01 | 100.0% | 32.3% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.53 | 36.0 | 3.58e-01 | 99.0% | 65.5% |
| 1droA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 40.0 | 3.81e-01 | 81.2% | 97.5% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.53 | 34.0 | 3.74e-01 | 99.0% | 82.5% |
| 3tfmA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.88e-01 | 79.2% | 99.0% |
| 2dn6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.60e-01 | 79.2% | 81.7% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 36.0 | 3.25e-01 | 77.2% | 67.8% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 42.0 | 3.25e-01 | 100.0% | 38.4% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 42.0 | 3.77e-01 | 100.0% | 65.5% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2072038 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.86 | 76.0 | 7.65e-01 | 99.0% | 94.1% |
| 3697243 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.83 | 70.0 | 6.38e-01 | 100.0% | 69.2% |
| 2069093 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.83 | 71.0 | 6.51e-01 | 100.0% | 72.2% |
| 3330336 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.78 | 69.0 | 6.54e-01 | 100.0% | 80.8% |
| 3665217 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.78 | 69.0 | 6.12e-01 | 100.0% | 68.6% |
| 3310707 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 67.0 | 6.15e-01 | 99.0% | 73.8% |
| 4387556 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.75 | 62.0 | 6.26e-01 | 100.0% | 89.9% |
| 3303901 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.75 | 59.0 | 5.06e-01 | 100.0% | 53.5% |
| 3334834 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.74 | 64.0 | 6.42e-01 | 100.0% | 92.3% |
| 3828376 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.73 | 60.0 | 5.53e-01 | 100.0% | 68.5% |
| 4680590 | 2.21.1.4 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SSO2105_N | 0.72 | 65.0 | 5.22e-01 | 100.0% | 93.8% |
| 4952916 | 109.4.1.3613 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIRAN | 0.71 | 64.0 | 4.52e-01 | 98.0% | 33.9% |
| 4263649 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.70 | 64.0 | 5.75e-01 | 100.0% | 76.4% |
| 4588531 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.70 | 64.0 | 5.86e-01 | 100.0% | 78.5% |
| 4342249 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.69 | 63.0 | 5.69e-01 | 100.0% | 81.5% |
| 4012275 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.67 | 59.0 | 5.25e-01 | 100.0% | 66.9% |
| 3325200 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.66 | 60.0 | 5.62e-01 | 100.0% | 86.4% |
| 3248470 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.66 | 59.0 | 5.63e-01 | 100.0% | 87.5% |
| 3627999 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.58 | 53.0 | 4.45e-01 | 100.0% | 100.0% |
| 3519116 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 49.0 | 4.06e-01 | 100.0% | 54.3% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.55 | 40.0 | 4.46e-01 | 100.0% | 97.5% |
| 3867614 | 220.1.1.34 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 | 0.54 | 41.0 | 2.62e-01 | 80.2% | 21.8% |
| 3876659 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.03e-01 | 79.2% | 42.3% |
| 3756566 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 40.0 | 2.79e-01 | 80.2% | 30.0% |
| 161941 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 40.0 | 3.77e-01 | 79.2% | 85.6% |
| 4078826 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 40.0 | 3.68e-01 | 79.2% | 83.1% |
| 3713805 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 35.0 | 2.51e-01 | 100.0% | 22.6% |
| 5083549 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.52 | 41.0 | 3.70e-01 | 86.1% | 99.3% |
| 1108129 | 222.1.1.18 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › RhiE_B | 0.52 | 40.0 | 3.62e-01 | 82.2% | 74.3% |