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MK448992.1__QBX31072.1__Javan6_0028__00022

Bact-Vir

MK448992.1__QBX31072.1__Javan6_0028__00022

Identity

Accession:
MK448992 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan6

TaxID: 2548281

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-62
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 34.0 3.37e-01 90.2% 46.3%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 34.0 3.31e-01 91.8% 49.3%
4izeA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 50.0 3.79e-01 100.0% 97.4%
4e6zA02 3.40.1350.100 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 43.0 3.84e-01 100.0% 62.9%
3seeA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 3.08e-01 100.0% 49.1%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 34.0 3.36e-01 70.5% 88.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385864 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.65 37.0 3.73e-01 91.8% 55.0%
1756511 6.1.1.15 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ins145_P3_rec 0.65 56.0 3.95e-01 100.0% 94.9%
3590224 11.1.4.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.64 56.0 4.41e-01 100.0% 57.8%
3678660 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 44.0 3.65e-01 100.0% 97.4%
3315068 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 44.0 3.35e-01 100.0% 98.7%
4025118 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 37.0 3.00e-01 83.6% 97.0%