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MK448993.1__QBX31125.1__Javan616_0032__00026
Bact-VirMK448993.1__QBX31125.1__Javan616_0032__00026
Identity
- Accession:
- MK448993 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 60-99
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 67.0 | 5.85e-01 | 97.5% | 87.3% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.74 | 49.0 | 3.70e-01 | 70.0% | 29.1% |
| 1nbwA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 50.0 | 4.95e-01 | 95.0% | 86.7% |
| 2vh2A02 | 3.40.50.11690 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cell division protein FtsQ/DivIB | 0.59 | 40.0 | 2.93e-01 | 75.0% | 23.7% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 40.0 | 3.72e-01 | 80.0% | 74.6% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.54 | 43.0 | 3.93e-01 | 97.5% | 66.1% |
| 3idpB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 42.0 | 2.86e-01 | 95.0% | 31.0% |
| 2qetA02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.53 | 35.0 | 3.05e-01 | 72.5% | 64.2% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 37.0 | 3.51e-01 | 87.5% | 82.5% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.51 | 42.0 | 3.49e-01 | 100.0% | 59.3% |
| 6kzdA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 40.0 | 2.68e-01 | 95.0% | 31.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4438245 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.70 | 58.0 | 4.53e-01 | 100.0% | 83.2% |
| 3949351 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.69 | 58.0 | 4.46e-01 | 97.5% | 76.3% |
| 3242784 | 2.1.1.218 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_DEPS-1_6th | 0.65 | 53.0 | 4.53e-01 | 100.0% | 55.7% |
| 4945146 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.61 | 41.0 | 3.90e-01 | 70.0% | 100.0% |
| 4992603 | 3463.1.1.2 ↗ | extended segments › Holliday junction recognition protein N-terminal domain › Holliday junction recognition protein N-terminal domain › Holliday junction recognition protein N-terminal domain › Cas12f1-like_TNB | 0.60 | 39.0 | 3.40e-01 | 95.0% | 41.5% |
| 3621335 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 48.0 | 3.94e-01 | 100.0% | 60.0% |
| 4029951 | 220.1.1.310 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29397, PF29398 | 0.59 | 41.0 | 2.98e-01 | 80.0% | 35.9% |
| 2429637 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.58 | 41.0 | 2.92e-01 | 75.0% | 22.8% |
| 5020293 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.52 | 36.0 | 3.53e-01 | 72.5% | 64.4% |
| 4423306 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.52 | 40.0 | 3.48e-01 | 97.5% | 69.3% |
| 3985761 | 4294.1.1.4 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › RlmA_N | 0.51 | 38.0 | 3.67e-01 | 100.0% | 72.0% |