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MK448994.1__QBX31151.1__Javan618_0001__00038
Bact-VirMK448994.1__QBX31151.1__Javan618_0001__00038
Identity
- Accession:
- MK448994 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-38
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 71.0 | 4.92e-01 | 100.0% | 28.9% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 68.0 | 3.82e-01 | 100.0% | 31.2% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.79 | 63.0 | 4.23e-01 | 100.0% | 39.6% |
| 2dt8A01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 55.0 | 3.65e-01 | 87.9% | 19.5% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 52.0 | 3.49e-01 | 90.9% | 20.0% |
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.68 | 55.0 | 4.28e-01 | 100.0% | 39.5% |
| 1z5zA02 | 1.20.120.850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain | 0.68 | 55.0 | 4.35e-01 | 97.0% | 69.7% |
| 4didB01 | 1.20.58.450 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog | 0.65 | 50.0 | 3.66e-01 | 100.0% | 70.2% |
| 4k17B03 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 54.0 | 2.95e-01 | 100.0% | 11.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261625 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.90 | 71.0 | 7.35e-01 | 87.9% | 100.0% |
| 4946413 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.89 | 70.0 | 4.48e-01 | 93.9% | 19.4% |
| 3211845 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.88 | 75.0 | 7.11e-01 | 100.0% | 82.5% |
| 3491670 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.87 | 73.0 | 6.18e-01 | 100.0% | 58.2% |
| 3781350 | 5041.1.1.20 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PF26669 | 0.81 | 66.0 | 4.54e-01 | 100.0% | 26.7% |
| 4949230 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.75 | 59.0 | 3.49e-01 | 93.9% | 35.4% |
| 3569939 | 207.1.1.249 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRRC37AB_C | 0.75 | 63.0 | 5.11e-01 | 100.0% | 50.8% |
| 4003475 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.74 | 59.0 | 4.37e-01 | 100.0% | 34.0% |
| 3686730 | 3443.1.1.1 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain › Get5_C | 0.72 | 59.0 | 5.62e-01 | 100.0% | 82.5% |
| 3500507 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.72 | 58.0 | 4.22e-01 | 100.0% | 33.3% |
| 3695863 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.65 | 55.0 | 3.38e-01 | 93.9% | 49.7% |
| 2035563 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.63 | 48.0 | 4.21e-01 | 93.9% | 52.5% |