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MK448999.1__QBX31437.1__Javan638_0020__00020
Bact-VirMK448999.1__QBX31437.1__Javan638_0020__00020
Identity
- Accession:
- MK448999 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-67
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3me5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 67.0 | 4.43e-01 | 100.0% | 44.8% |
| 2c7rA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 67.0 | 4.61e-01 | 100.0% | 46.9% |
| 3futA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 63.0 | 4.47e-01 | 100.0% | 31.2% |
| 3dliA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.72 | 64.0 | 4.40e-01 | 100.0% | 40.7% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 63.0 | 4.43e-01 | 100.0% | 43.9% |
| 1y8cA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 57.0 | 4.13e-01 | 100.0% | 50.5% |
| 1dzfA01 | 3.40.1340.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain | 0.63 | 48.0 | 3.83e-01 | 84.4% | 47.1% |
| 3apoA06 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 48.0 | 4.13e-01 | 92.2% | 99.1% |
| 2xciA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 49.0 | 3.68e-01 | 100.0% | 35.8% |
| 4pysA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 47.0 | 3.08e-01 | 100.0% | 80.8% |
| 1m9nA04 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.57 | 50.0 | 3.58e-01 | 100.0% | 35.0% |
| 2p4dA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 46.0 | 3.55e-01 | 98.4% | 44.2% |
| 1w4vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 44.0 | 3.83e-01 | 93.8% | 97.3% |
| 5z6bA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 39.0 | 3.01e-01 | 90.6% | 75.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4960172 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.66 | 56.0 | 4.00e-01 | 100.0% | 44.8% |
| 4998836 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.64 | 55.0 | 3.88e-01 | 100.0% | 42.7% |
| 3953074 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.64 | 56.0 | 4.21e-01 | 100.0% | 60.6% |