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MK494099.1__QBP29722.1__SEA_TYPHA_67__00065
Bact-VirMK494099.1__QBP29722.1__SEA_TYPHA_67__00065
Identity
- Accession:
- MK494099 ↗
- Kingdom:
- phage
Quality
61.1
mean pLDDT
Taxonomy
TaxID: 2517971
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-73
Domain cluster:
rep: NC_031231.1__YP_009301334.1__BJD78_gp77__00077__D51-119
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p02B02 | 3.30.379.20 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › | 0.78 | 43.0 | 3.30e-01 | 94.6% | 25.4% |
| 2b0vA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.66 | 59.0 | 4.31e-01 | 100.0% | 59.5% |
| 4dywA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 57.0 | 4.37e-01 | 100.0% | 68.2% |
| 4nfwF00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 56.0 | 4.08e-01 | 100.0% | 57.5% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 55.0 | 4.12e-01 | 100.0% | 62.2% |
| 1sjyA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 54.0 | 3.93e-01 | 100.0% | 57.8% |
| 1hztA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 54.0 | 3.92e-01 | 100.0% | 62.1% |
| 1vc9A01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 51.0 | 4.08e-01 | 100.0% | 68.0% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 52.0 | 3.91e-01 | 100.0% | 70.9% |
| 3edsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 48.0 | 3.80e-01 | 100.0% | 64.7% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.28e-01 | 94.6% | 69.4% |
| 4mpoB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 49.0 | 3.57e-01 | 94.6% | 63.5% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.55 | 38.0 | 3.51e-01 | 100.0% | 55.4% |
| 3cngC02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 46.0 | 3.52e-01 | 100.0% | 59.4% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 48.0 | 3.98e-01 | 100.0% | 54.9% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 49.0 | 3.45e-01 | 100.0% | 59.3% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 49.0 | 3.48e-01 | 100.0% | 57.4% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 43.0 | 3.85e-01 | 91.1% | 95.2% |
| 1ewiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.41e-01 | 100.0% | 44.7% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 43.0 | 3.65e-01 | 98.2% | 53.3% |
| 6jmgB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 3.31e-01 | 100.0% | 58.4% |
| 2hxsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.24e-01 | 100.0% | 55.6% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.52 | 42.0 | 2.76e-01 | 100.0% | 53.7% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.64e-01 | 98.2% | 69.0% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 39.0 | 2.99e-01 | 87.5% | 81.0% |
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.50 | 34.0 | 2.84e-01 | 71.4% | 96.4% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.50 | 29.0 | 3.43e-01 | 89.3% | 81.1% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3365669 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.70 | 62.0 | 4.97e-01 | 100.0% | 50.9% |
| 4084495 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.69 | 60.0 | 4.92e-01 | 100.0% | 53.3% |
| 3600258 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.69 | 56.0 | 4.65e-01 | 100.0% | 51.0% |
| 3280317 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.67 | 60.0 | 4.39e-01 | 100.0% | 62.1% |
| 3742210 | 221.4.1.7 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 | 0.66 | 56.0 | 3.73e-01 | 100.0% | 77.4% |
| 5061791 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.66 | 58.0 | 4.43e-01 | 100.0% | 66.2% |
| 3987874 | 375.1.1.253 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 | 0.66 | 53.0 | 4.80e-01 | 94.6% | 65.3% |
| 3716787 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 55.0 | 4.44e-01 | 100.0% | 48.2% |
| 3702749 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.65 | 55.0 | 4.41e-01 | 100.0% | 48.2% |
| 4937578 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 56.0 | 4.27e-01 | 100.0% | 66.7% |
| 5058482 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.64 | 57.0 | 4.21e-01 | 100.0% | 66.4% |
| 3690510 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.63 | 55.0 | 4.44e-01 | 98.2% | 52.7% |
| 3166475 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.62 | 53.0 | 4.50e-01 | 98.2% | 95.8% |
| 4954158 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.62 | 54.0 | 4.16e-01 | 100.0% | 69.0% |
| 6238 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.62 | 54.0 | 3.93e-01 | 100.0% | 57.8% |
| 2330653 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.61 | 52.0 | 4.47e-01 | 98.2% | 59.6% |
| 3508135 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.61 | 52.0 | 4.69e-01 | 100.0% | 68.8% |
| 3925978 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.60 | 52.0 | 3.74e-01 | 96.4% | 78.2% |
| 3282801 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.60 | 52.0 | 3.78e-01 | 96.4% | 58.7% |
| 3747587 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.58 | 50.0 | 3.97e-01 | 100.0% | 72.5% |
| 3995685 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.57 | 50.0 | 4.03e-01 | 100.0% | 50.5% |
| 3714632 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 50.0 | 3.52e-01 | 100.0% | 42.8% |
| 3574232 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.57 | 48.0 | 3.05e-01 | 96.4% | 61.6% |
| 4047115 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.57 | 46.0 | 3.97e-01 | 98.2% | 56.0% |
| 3511989 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.57 | 51.0 | 3.80e-01 | 100.0% | 51.1% |
| 3484810 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.57 | 51.0 | 3.72e-01 | 100.0% | 47.6% |
| 4569015 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.57 | 50.0 | 3.69e-01 | 100.0% | 44.2% |
| 3580573 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.57 | 50.0 | 3.58e-01 | 100.0% | 41.8% |
| 3424942 | 59.1.1.3 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_alpha | 0.56 | 45.0 | 3.74e-01 | 96.4% | 85.2% |
| 3600935 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.56 | 50.0 | 3.66e-01 | 100.0% | 45.3% |
| 3375524 | 2.1.1.229 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 | 0.56 | 50.0 | 3.90e-01 | 100.0% | 46.7% |
| 1291948 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.56 | 49.0 | 3.58e-01 | 100.0% | 42.4% |
| 4680392 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.56 | 49.0 | 3.93e-01 | 100.0% | 50.0% |
| 3496161 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.56 | 49.0 | 3.50e-01 | 100.0% | 40.0% |
| 2700715 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.56 | 49.0 | 3.67e-01 | 100.0% | 51.7% |
| 4025203 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.56 | 49.0 | 3.72e-01 | 100.0% | 46.3% |
| 4137219 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.56 | 45.0 | 3.88e-01 | 96.4% | 55.0% |
| 4926970 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.56 | 47.0 | 3.51e-01 | 94.6% | 62.5% |
| 4028419 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.55 | 49.0 | 3.41e-01 | 100.0% | 32.2% |
| 4104133 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.55 | 49.0 | 3.38e-01 | 100.0% | 35.1% |
| 4245798 | 508.1.1.1 ↗ | a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › PIH1 | 0.55 | 48.0 | 3.63e-01 | 100.0% | 47.1% |
| 3714786 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 49.0 | 3.34e-01 | 100.0% | 50.5% |
| 5029983 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.55 | 47.0 | 3.27e-01 | 100.0% | 51.0% |
| 3699668 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.55 | 48.0 | 3.10e-01 | 100.0% | 28.7% |
| 4047327 | 221.4.1.6 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX-like | 0.53 | 44.0 | 3.70e-01 | 100.0% | 53.0% |
| 3025136 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.53 | 40.0 | 3.05e-01 | 87.5% | 80.6% |
| 3249053 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 46.0 | 3.11e-01 | 100.0% | 37.6% |
| 3265408 | 2004.1.1.453 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, NOG1 | 0.52 | 45.0 | 3.19e-01 | 100.0% | 60.5% |
| 4032675 | 325.1.7.52 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25997 | 0.52 | 40.0 | 3.52e-01 | 82.1% | 62.5% |
| 3706651 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.52 | 45.0 | 3.08e-01 | 100.0% | 37.6% |
| 4327607 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 42.0 | 3.10e-01 | 100.0% | 54.4% |
| 3784046 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.51 | 43.0 | 3.27e-01 | 92.9% | 75.6% |
| 3588379 | 375.1.1.90 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 | 0.50 | 41.0 | 3.92e-01 | 96.4% | 76.9% |
| 3692168 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 43.0 | 2.52e-01 | 100.0% | 37.1% |