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MK504443.1__QBJ03453.1__B521_0103__00103
Bact-VirMK504443.1__QBJ03453.1__B521_0103__00103
Identity
- Accession:
- MK504443 ↗
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Taxonomy
TaxID: 2510942
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
rep: MF356679.1__ASR76378.1__D6_6__00006__D98-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11195.15 best | Tad2-like | 75.1 | 7.30e-21 | 100.0% | 94.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 35.0 | 3.96e-01 | 78.2% | 79.1% |
| 7chdE01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.43e-01 | 85.1% | 67.5% |
| 3rpjA00 | 3.30.310.230 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sigma factor-binding protein Crl monomer | 0.52 | 35.0 | 3.12e-01 | 87.4% | 46.8% |
| 3fcgB00 | 2.60.40.3110 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein | 0.52 | 27.0 | 2.97e-01 | 100.0% | 60.6% |
| 3h4zB03 | 3.15.10.50 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › | 0.52 | 36.0 | 2.83e-01 | 72.4% | 40.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588096 | 4.1.1.189 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2829 | 0.88 | 68.0 | 7.39e-01 | 100.0% | 95.9% |
| 4987019 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 34.0 | 3.63e-01 | 81.6% | 64.0% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.57 | 47.0 | 4.78e-01 | 100.0% | 91.8% |
| 3505097 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.54 | 42.0 | 4.32e-01 | 100.0% | 87.1% |
| 2697035 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 44.0 | 3.50e-01 | 89.7% | 98.9% |
| 3785886 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.51 | 36.0 | 2.81e-01 | 74.7% | 68.8% |
D2
medium
residues 103-229