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MK504445.1__QBJ03698.1__ATCCB_0005__00005
Bact-VirMK504445.1__QBJ03698.1__ATCCB_0005__00005
Identity
- Accession:
- MK504445 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-86
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.64 | 34.0 | 3.94e-01 | 86.9% | 70.5% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.61 | 37.0 | 3.98e-01 | 95.2% | 71.8% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.58 | 32.0 | 3.85e-01 | 76.2% | 86.3% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 49.0 | 3.66e-01 | 97.6% | 97.8% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 48.0 | 3.61e-01 | 97.6% | 97.4% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.56 | 41.0 | 3.87e-01 | 79.8% | 80.2% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.54 | 38.0 | 4.08e-01 | 92.9% | 85.9% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.28e-01 | 85.7% | 70.9% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.53 | 39.0 | 3.26e-01 | 81.0% | 87.4% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.35e-01 | 79.8% | 67.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.51 | 39.0 | 3.96e-01 | 100.0% | 81.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.59 | 35.0 | 4.14e-01 | 91.7% | 89.1% |
| 4992459 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.58 | 40.0 | 4.34e-01 | 100.0% | 88.6% |
| 4426077 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.57 | 44.0 | 3.66e-01 | 84.5% | 85.8% |
| 4930594 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 38.0 | 3.95e-01 | 100.0% | 77.3% |
| 3315072 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.56 | 30.0 | 3.30e-01 | 81.0% | 63.1% |
| 4959385 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.56 | 37.0 | 3.94e-01 | 100.0% | 78.7% |
| 2559760 | 216.1.1.5 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › BRE | 0.55 | 37.0 | 3.32e-01 | 85.7% | 48.8% |
| 5061264 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.54 | 40.0 | 4.13e-01 | 100.0% | 83.7% |
| 4047125 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.54 | 29.0 | 3.24e-01 | 88.1% | 64.6% |
| 3577035 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 41.0 | 3.59e-01 | 100.0% | 53.8% |
| 5045322 | 331.6.1.0 ↗ | a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain | 0.53 | 40.0 | 3.55e-01 | 100.0% | 54.4% |
| 846 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 42.0 | 3.28e-01 | 85.7% | 70.9% |
| 4482227 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.53 | 44.0 | 3.16e-01 | 97.6% | 92.5% |
| 3589339 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.52 | 39.0 | 3.84e-01 | 100.0% | 72.6% |
| 5011912 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.51 | 38.0 | 3.72e-01 | 79.8% | 88.4% |
| 4988530 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.51 | 39.0 | 3.71e-01 | 82.1% | 77.8% |
| 5009165 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.51 | 39.0 | 3.60e-01 | 83.3% | 81.7% |
| 2323821 | 4212.2.1.0 ↗ | beta barrels › FimD N-terminal domain-like | 0.50 | 39.0 | 3.63e-01 | 82.1% | 79.6% |