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MK504445.1__QBJ03756.1__ATCCB_0063__00063
Bact-VirMK504445.1__QBJ03756.1__ATCCB_0063__00063
Identity
- Accession:
- MK504445 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-103
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k8pC01 | 1.20.58.1440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 34.0 | 3.16e-01 | 91.7% | 37.1% |
| 5b1aJ00 | 4.10.91.10 | Few Secondary Structures › Irregular › Cytochrome C Oxidase; Chain J › Cytochrome c oxidase, subunit VIIa | 0.67 | 42.0 | 5.00e-01 | 72.6% | 93.1% |
| 7febA03 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.54 | 30.0 | 2.91e-01 | 86.9% | 47.8% |
| 4g6tB00 | 6.10.20.120 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.50 | 32.0 | 3.41e-01 | 82.1% | 76.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4163138 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.76 | 27.0 | 3.14e-01 | 86.9% | 43.1% |
| 4279367 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.68 | 31.0 | 3.22e-01 | 95.2% | 43.8% |
| 3716683 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.62 | 42.0 | 3.59e-01 | 100.0% | 43.0% |
| 3575264 | 604.12.1.61 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like | 0.60 | 43.0 | 3.94e-01 | 100.0% | 55.7% |
| 3394140 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.59 | 44.0 | 3.01e-01 | 100.0% | 23.2% |
| 3553628 | 109.4.1.120 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2 | 0.58 | 50.0 | 3.31e-01 | 95.2% | 33.4% |
| 3214720 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 44.0 | 4.26e-01 | 98.8% | 74.7% |
| 4954786 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.54 | 40.0 | 4.08e-01 | 100.0% | 80.0% |
| 3786162 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 43.0 | 4.18e-01 | 98.8% | 75.8% |
| 3873199 | 109.4.1.1918 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, Xpo1, PF26714 | 0.54 | 42.0 | 2.37e-01 | 85.7% | 15.2% |
| 3778206 | 109.4.1.553 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N,Xpo1 | 0.54 | 42.0 | 2.43e-01 | 85.7% | 20.1% |
| 3403130 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.53 | 41.0 | 3.32e-01 | 98.8% | 42.4% |
| 3068418 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.51 | 38.0 | 3.78e-01 | 92.9% | 75.0% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 46.0 | 4.14e-01 | 100.0% | 73.0% |
| 3742998 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.50 | 39.0 | 3.14e-01 | 86.9% | 65.6% |
| 5036014 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 41.0 | 4.00e-01 | 92.9% | 78.9% |
| 4977598 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 46.0 | 4.18e-01 | 100.0% | 77.3% |