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MK504445.1__QBJ03765.1__ATCCB_0072__00072
Bact-VirMK504445.1__QBJ03765.1__ATCCB_0072__00072
Identity
- Accession:
- MK504445 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-96
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.70 | 59.0 | 4.30e-01 | 100.0% | 62.3% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.69 | 58.0 | 4.11e-01 | 100.0% | 79.9% |
| 2mtvA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.69 | 58.0 | 4.15e-01 | 100.0% | 60.3% |
| 3n2qA02 | 3.30.300.190 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.68 | 58.0 | 4.48e-01 | 100.0% | 54.3% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.68 | 56.0 | 4.07e-01 | 95.8% | 38.3% |
| 2hd9A00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.68 | 56.0 | 4.15e-01 | 100.0% | 66.2% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 56.0 | 4.33e-01 | 93.8% | 47.2% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.68 | 56.0 | 4.00e-01 | 100.0% | 51.8% |
| 4rcmB00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.67 | 56.0 | 4.03e-01 | 100.0% | 57.9% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.67 | 49.0 | 4.51e-01 | 83.3% | 60.3% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.67 | 50.0 | 4.58e-01 | 83.3% | 61.9% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.67 | 57.0 | 5.42e-01 | 95.8% | 87.5% |
| 2crhA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 55.0 | 4.42e-01 | 97.9% | 48.0% |
| 1rjaA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 55.0 | 4.43e-01 | 100.0% | 53.0% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.65 | 54.0 | 3.55e-01 | 100.0% | 24.5% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.65 | 54.0 | 3.46e-01 | 100.0% | 24.2% |
| 5fclE01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.65 | 47.0 | 3.95e-01 | 81.2% | 47.8% |
| 2ablA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 54.0 | 4.42e-01 | 97.9% | 50.5% |
| 1ce7A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.64 | 54.0 | 3.84e-01 | 100.0% | 48.1% |
| 2kksA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.64 | 52.0 | 3.89e-01 | 100.0% | 37.7% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 54.0 | 4.03e-01 | 95.8% | 38.9% |
| 1ayaA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.64 | 54.0 | 4.33e-01 | 97.9% | 49.5% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.64 | 50.0 | 3.91e-01 | 95.8% | 49.2% |
| 1iftA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.64 | 54.0 | 3.74e-01 | 100.0% | 44.8% |
| 3ktzA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.63 | 53.0 | 3.73e-01 | 100.0% | 45.2% |
| 2vsqA03 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 50.0 | 3.53e-01 | 100.0% | 31.1% |
| 3hutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 3.81e-01 | 100.0% | 33.3% |
| 1amuA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 51.0 | 3.74e-01 | 93.8% | 33.6% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.63 | 50.0 | 3.78e-01 | 100.0% | 60.7% |
| 3ctkA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.62 | 53.0 | 3.69e-01 | 100.0% | 43.7% |
| 1rpyB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 51.0 | 4.33e-01 | 95.8% | 59.3% |
| 3h5kA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.62 | 52.0 | 3.63e-01 | 100.0% | 42.4% |
| 2c9wA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 52.0 | 4.00e-01 | 95.8% | 43.4% |
| 1xa6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 52.0 | 4.19e-01 | 100.0% | 62.5% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.61 | 48.0 | 3.64e-01 | 97.9% | 90.8% |
| 3lbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 53.0 | 3.51e-01 | 100.0% | 24.6% |
| 1i2dA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.60 | 49.0 | 3.42e-01 | 97.9% | 69.7% |
| 3us4A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 50.0 | 4.11e-01 | 97.9% | 50.5% |
| 3q41B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 3.48e-01 | 100.0% | 26.7% |
| 3iteB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 50.0 | 2.97e-01 | 100.0% | 13.2% |
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.60 | 48.0 | 3.55e-01 | 100.0% | 40.0% |
| 2izvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 48.0 | 3.41e-01 | 95.8% | 30.1% |
| 1milA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 49.0 | 3.91e-01 | 95.8% | 44.2% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.59 | 47.0 | 3.00e-01 | 100.0% | 19.5% |
| 3o7bA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.59 | 48.0 | 3.25e-01 | 100.0% | 59.3% |
| 8a8gA01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.58 | 47.0 | 3.52e-01 | 97.9% | 90.0% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.57 | 49.0 | 3.57e-01 | 100.0% | 46.1% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.57 | 44.0 | 4.14e-01 | 97.9% | 86.6% |
| 2v7bA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 44.0 | 2.72e-01 | 100.0% | 13.8% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.56 | 47.0 | 3.39e-01 | 100.0% | 83.1% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.56 | 45.0 | 3.22e-01 | 100.0% | 73.5% |
| 5ghrA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 44.0 | 3.49e-01 | 100.0% | 64.0% |
| 1pm3A00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.56 | 43.0 | 3.82e-01 | 100.0% | 59.4% |
| 2cx0A02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.55 | 45.0 | 3.90e-01 | 97.9% | 94.0% |
| 1r3fA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.55 | 43.0 | 4.11e-01 | 100.0% | 87.7% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.55 | 43.0 | 2.72e-01 | 100.0% | 18.7% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 38.0 | 3.62e-01 | 75.0% | 91.2% |
| 3oz2A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.53 | 44.0 | 3.17e-01 | 100.0% | 41.9% |
| 2dirA01 | 3.30.2300.10 | Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily | 0.53 | 42.0 | 3.47e-01 | 87.5% | 69.0% |
| 2wlrA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.52 | 42.0 | 3.16e-01 | 100.0% | 73.8% |
| 4fk5A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 39.0 | 2.56e-01 | 97.9% | 43.6% |
| 3aljA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 42.0 | 3.08e-01 | 100.0% | 50.7% |
| 1dpjA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 40.0 | 3.03e-01 | 100.0% | 70.8% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3429344 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.75 | 64.0 | 3.87e-01 | 100.0% | 18.2% |
| 5037760 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.74 | 61.0 | 4.36e-01 | 93.8% | 81.4% |
| 3287308 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.73 | 64.0 | 4.21e-01 | 100.0% | 30.5% |
| 5035541 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 60.0 | 4.89e-01 | 100.0% | 100.0% |
| 4943282 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.69 | 60.0 | 4.09e-01 | 100.0% | 44.4% |
| 1164098 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.68 | 58.0 | 4.48e-01 | 100.0% | 54.3% |
| 3603513 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 57.0 | 4.15e-01 | 100.0% | 70.3% |
| 1164102 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.68 | 56.0 | 4.30e-01 | 100.0% | 50.8% |
| 4963143 | 2008.1.1.228 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5787 | 0.68 | 50.0 | 3.40e-01 | 83.3% | 21.7% |
| 3801699 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.68 | 57.0 | 4.40e-01 | 95.8% | 44.5% |
| 5038074 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.67 | 56.0 | 3.67e-01 | 97.9% | 51.1% |
| 4871885 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 56.0 | 4.44e-01 | 95.8% | 49.5% |
| 4303964 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 56.0 | 5.07e-01 | 100.0% | 90.0% |
| 3415161 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.66 | 56.0 | 3.48e-01 | 95.8% | 18.2% |
| 4449349 | 2003.1.5.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › EcoRI_methylase | 0.66 | 57.0 | 3.47e-01 | 100.0% | 17.7% |
| 3750819 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.66 | 55.0 | 4.00e-01 | 95.8% | 38.8% |
| 3414351 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 56.0 | 3.85e-01 | 100.0% | 46.3% |
| 4999516 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.65 | 53.0 | 3.99e-01 | 100.0% | 63.0% |
| 3414808 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 54.0 | 4.07e-01 | 95.8% | 40.8% |
| 3793075 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 52.0 | 3.81e-01 | 93.8% | 35.6% |
| 3989236 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.63 | 53.0 | 3.41e-01 | 100.0% | 25.1% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 51.0 | 3.87e-01 | 100.0% | 80.6% |
| 3511271 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.63 | 54.0 | 4.15e-01 | 100.0% | 53.0% |
| 4659422 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 50.0 | 4.79e-01 | 97.9% | 95.0% |
| 3513932 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.63 | 54.0 | 4.15e-01 | 100.0% | 49.6% |
| 4125079 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 52.0 | 4.78e-01 | 97.9% | 93.8% |
| 2322691 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 51.0 | 3.95e-01 | 97.9% | 40.2% |
| 3933443 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 51.0 | 4.61e-01 | 95.8% | 70.0% |
| 4031881 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.62 | 47.0 | 3.27e-01 | 100.0% | 23.4% |
| 3842643 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 53.0 | 3.98e-01 | 100.0% | 50.4% |
| 4165496 | 2006.1.4.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N | 0.61 | 46.0 | 3.18e-01 | 100.0% | 22.2% |
| 3546286 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 50.0 | 3.80e-01 | 95.8% | 39.2% |
| 3645612 | 1.1.9.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › Dev_Cell_Death | 0.61 | 49.0 | 3.71e-01 | 100.0% | 62.9% |
| 4987053 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 49.0 | 3.70e-01 | 100.0% | 52.1% |
| 3481722 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.60 | 49.0 | 3.91e-01 | 95.8% | 45.7% |
| 3547031 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 50.0 | 3.86e-01 | 95.8% | 40.7% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 47.0 | 3.85e-01 | 95.8% | 95.2% |
| 4576540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 48.0 | 4.59e-01 | 97.9% | 88.3% |
| 4132740 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.60 | 47.0 | 3.42e-01 | 97.9% | 78.2% |
| 5048970 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 50.0 | 4.48e-01 | 95.8% | 98.6% |
| 4972735 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.59 | 50.0 | 3.01e-01 | 100.0% | 18.4% |
| 3502261 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.59 | 51.0 | 3.73e-01 | 97.9% | 44.4% |
| 4557607 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.59 | 48.0 | 4.43e-01 | 95.8% | 86.2% |
| 3394318 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.58 | 47.0 | 4.03e-01 | 95.8% | 94.1% |
| 3883097 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 48.0 | 4.35e-01 | 97.9% | 67.1% |
| 3300189 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.58 | 46.0 | 3.92e-01 | 95.8% | 86.7% |
| 3212241 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 47.0 | 3.64e-01 | 95.8% | 40.0% |
| 3928952 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.58 | 46.0 | 3.42e-01 | 100.0% | 45.8% |
| 4346458 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.57 | 46.0 | 3.29e-01 | 100.0% | 81.1% |
| 3437531 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 44.0 | 3.18e-01 | 95.8% | 28.6% |
| 3591571 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 46.0 | 2.70e-01 | 100.0% | 55.8% |
| 3511994 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.57 | 44.0 | 3.86e-01 | 95.8% | 87.1% |
| 3480390 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 45.0 | 3.85e-01 | 97.9% | 90.0% |
| None | — | 0.56 | 44.0 | 3.81e-01 | 95.8% | 89.4% | |
| 168 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.55 | 45.0 | 3.73e-01 | 95.8% | 82.8% |
| 5063642 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.55 | 43.0 | 3.65e-01 | 97.9% | 77.0% |
| 4928397 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.55 | 45.0 | 3.46e-01 | 97.9% | 58.9% |
| 4316169 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.55 | 45.0 | 4.12e-01 | 93.8% | 89.2% |
| 5079425 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.55 | 44.0 | 3.74e-01 | 97.9% | 81.1% |
| 4285702 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 44.0 | 3.62e-01 | 100.0% | 73.3% |
| 4946184 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.54 | 43.0 | 3.80e-01 | 95.8% | 90.0% |
| 3701932 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.54 | 43.0 | 3.44e-01 | 97.9% | 64.2% |
| 4625547 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.54 | 47.0 | 3.73e-01 | 100.0% | 89.5% |
| 3202775 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.54 | 44.0 | 3.65e-01 | 97.9% | 89.5% |
| 4408562 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.54 | 43.0 | 3.47e-01 | 100.0% | 81.7% |
| 3261527 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.54 | 43.0 | 3.23e-01 | 100.0% | 49.0% |
| 4040604 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.53 | 42.0 | 3.48e-01 | 100.0% | 79.0% |
D2
high
residues 144-204
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.81 | 61.0 | 4.45e-01 | 80.3% | 34.0% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.81 | 60.0 | 4.58e-01 | 80.3% | 36.6% |
| 2o5vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 55.0 | 3.89e-01 | 77.0% | 55.8% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 60.0 | 4.65e-01 | 95.1% | 47.0% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.69 | 54.0 | 4.53e-01 | 86.9% | 86.0% |
| 4bhrA00 | 3.30.1300.70 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.68 | 50.0 | 4.59e-01 | 78.7% | 69.1% |
| 1a57A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 53.0 | 4.45e-01 | 93.4% | 56.0% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.65 | 52.0 | 4.37e-01 | 88.5% | 75.5% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.64 | 55.0 | 3.64e-01 | 100.0% | 91.1% |
| 2wjsA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 53.0 | 3.89e-01 | 91.8% | 65.8% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 53.0 | 3.98e-01 | 93.4% | 79.5% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.63 | 52.0 | 3.44e-01 | 93.4% | 49.1% |
| 2h0bC00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 3.83e-01 | 98.4% | 54.1% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 53.0 | 4.13e-01 | 98.4% | 44.4% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 51.0 | 3.58e-01 | 95.1% | 79.4% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 46.0 | 4.23e-01 | 86.9% | 95.2% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 48.0 | 3.63e-01 | 100.0% | 36.6% |
| 2r16A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.72e-01 | 100.0% | 56.0% |
| 2erfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 3.50e-01 | 100.0% | 56.5% |
| 1pmiA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 45.0 | 3.62e-01 | 85.2% | 64.7% |
| 1h30A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 3.36e-01 | 93.4% | 55.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.58 | 42.0 | 3.47e-01 | 78.7% | 47.5% |
| 8axiA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 45.0 | 2.88e-01 | 95.1% | 37.4% |
| 2c9wA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 43.0 | 3.70e-01 | 93.4% | 61.1% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 43.0 | 3.50e-01 | 86.9% | 80.0% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 47.0 | 3.94e-01 | 100.0% | 99.1% |
| 3u1xA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 45.0 | 3.25e-01 | 98.4% | 69.1% |
| 3kb5A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 44.0 | 3.23e-01 | 95.1% | 59.1% |
| 4emiA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.51 | 43.0 | 3.71e-01 | 90.2% | 91.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 820 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.81 | 60.0 | 4.58e-01 | 80.3% | 36.6% |
| 4031750 | 274.1.1.25 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF | 0.78 | 56.0 | 4.68e-01 | 88.5% | 46.5% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.78 | 67.0 | 4.67e-01 | 93.4% | 35.0% |
| 4681650 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.77 | 69.0 | 4.89e-01 | 98.4% | 39.4% |
| 2103558 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.77 | 66.0 | 4.97e-01 | 93.4% | 44.9% |
| 3929502 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.76 | 64.0 | 5.55e-01 | 93.4% | 67.0% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.76 | 66.0 | 5.16e-01 | 96.7% | 62.3% |
| 4052154 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.75 | 62.0 | 4.50e-01 | 91.8% | 37.1% |
| 5048348 | 3080.1.1.0 ↗ | a+b complex topology › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins | 0.74 | 60.0 | 4.10e-01 | 86.9% | 39.5% |
| 4419937 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.73 | 64.0 | 5.74e-01 | 96.7% | 71.8% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.73 | 61.0 | 4.38e-01 | 91.8% | 36.6% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.73 | 54.0 | 4.41e-01 | 78.7% | 100.0% |
| 4544568 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.71 | 53.0 | 4.39e-01 | 80.3% | 100.0% |
| 3243569 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.70 | 55.0 | 3.69e-01 | 85.2% | 25.2% |
| 818 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.69 | 59.0 | 4.61e-01 | 95.1% | 49.6% |
| 3222830 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.69 | 53.0 | 3.58e-01 | 83.6% | 25.3% |
| 3701925 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.67 | 52.0 | 4.21e-01 | 85.2% | 60.8% |
| 3518998 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.66 | 51.0 | 3.73e-01 | 82.0% | 76.1% |
| 4961380 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.66 | 53.0 | 4.10e-01 | 86.9% | 81.5% |
| 3743299 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.65 | 53.0 | 4.32e-01 | 86.9% | 77.3% |
| 3684934 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 48.0 | 3.32e-01 | 82.0% | 50.5% |
| 3523656 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 53.0 | 3.56e-01 | 95.1% | 66.5% |
| 5791 | 295.1.1.6 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 | 0.58 | 42.0 | 3.48e-01 | 78.7% | 47.9% |
| 5017154 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 44.0 | 3.46e-01 | 85.2% | 80.0% |
| 4003998 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.56 | 42.0 | 3.42e-01 | 85.2% | 46.2% |
D3
high
residues 289-386
Domain cluster:
rep: MW073017.1__QPB08539.1__X__00060__D1038-1127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13884.12 best | Peptidase_S74 | 27.1 | 5.50e-06 | 48.0% | 72.4% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l9aA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.57 | 30.0 | 3.18e-01 | 72.4% | 54.0% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.57 | 41.0 | 2.74e-01 | 75.5% | 93.4% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 45.0 | 4.38e-01 | 100.0% | 78.3% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.55 | 47.0 | 3.23e-01 | 99.0% | 71.0% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 48.0 | 4.19e-01 | 98.0% | 68.9% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 4.05e-01 | 86.7% | 83.5% |
| 3mcwA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.52 | 40.0 | 3.29e-01 | 84.7% | 100.0% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 47.0 | 4.23e-01 | 98.0% | 75.2% |
| 4bqqA01 | 3.40.50.1390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain | 0.51 | 32.0 | 2.81e-01 | 89.8% | 44.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5070087 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.85 | 50.0 | 5.44e-01 | 95.9% | 69.4% |
| 3273707 | 3240.1.1.2 ↗ | alpha arrays › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Peptidase_S74,MYRF_ICA | 0.74 | 58.0 | 5.27e-01 | 81.6% | 72.0% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.73 | 38.0 | 3.91e-01 | 98.0% | 52.6% |
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.70 | 33.0 | 3.72e-01 | 81.6% | 58.7% |
| 3170708 | 632.1.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Pho88 | 0.70 | 36.0 | 3.12e-01 | 96.9% | 34.5% |
| 4463557 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 44.0 | 4.46e-01 | 100.0% | 75.8% |
| 164359 | 7513.1.1.1 ↗ | a/b three-layered sandwiches › CofD-like › CofD-like › CofD-like › CofD | 0.60 | 45.0 | 3.21e-01 | 81.6% | 98.2% |
| 3800197 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.57 | 28.0 | 2.90e-01 | 77.6% | 47.8% |
| 3632380 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.56 | 50.0 | 3.75e-01 | 96.9% | 86.8% |
| 1511065 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.56 | 46.0 | 4.51e-01 | 89.8% | 85.2% |
| 4025011 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.55 | 37.0 | 3.51e-01 | 84.7% | 57.5% |
| 3235191 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 45.0 | 3.09e-01 | 90.8% | 52.2% |
| 3256264 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.53 | 34.0 | 3.92e-01 | 84.7% | 90.0% |
| 5041857 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 48.0 | 4.25e-01 | 98.0% | 72.7% |
| 4028221 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.53 | 40.0 | 3.34e-01 | 100.0% | 46.7% |
| 4928071 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.53 | 40.0 | 2.77e-01 | 79.6% | 79.7% |
| 3903910 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.52 | 46.0 | 3.73e-01 | 99.0% | 76.3% |
| 3859550 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 45.0 | 4.15e-01 | 100.0% | 75.0% |
| 5077394 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.51 | 43.0 | 4.12e-01 | 100.0% | 77.4% |
| 3358614 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.50 | 42.0 | 3.20e-01 | 94.9% | 49.8% |
| 4210436 | 7090.1.1.1 ↗ | extended segments › Glycyl radical domain › Glycyl radical domain › Glycyl radical domain › Gly_radical | 0.50 | 28.0 | 2.64e-01 | 81.6% | 42.4% |