←Back to structures

MK510969.1__QBI77488.1__X__00001

Bact-Vir

MK510969.1__QBI77488.1__X__00001

Identity

Accession:
MK510969 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_vB_Pae_CF60a

TaxID: 2563581

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-23_39-66
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kvdA00 4.10.420.10 Few Secondary Structures › Irregular › Smk Toxin, alpha chain › Smk Toxin, alpha chain 0.72 43.0 3.97e-01 74.5% 46.0%
3bezA02 3.40.1750.10 Alpha Beta › 3-Layer(aba) Sandwich › peptide peptidase (sppa) fold › peptide peptidase (sppa) like domain 0.71 56.0 4.45e-01 84.3% 75.3%
2k9yA00 1.20.5.510 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin 0.70 45.0 4.96e-01 74.5% 82.9%
1pzrA00 6.10.40.10 Special › Helix non-globular › Histone, subunit A › 0.64 44.0 4.22e-01 72.5% 85.0%
8befJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.64 46.0 3.12e-01 76.5% 65.3%
7r7jB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 38.0 2.74e-01 70.6% 21.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5000872 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.75 52.0 3.87e-01 72.5% 35.2%
3220054 604.5.1.34 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ELO 0.65 50.0 3.16e-01 84.3% 25.7%
5072955 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.64 45.0 3.44e-01 74.5% 34.2%
3701811 2487.1.1.0 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.64 49.0 3.50e-01 80.4% 36.3%
3573532 2007.15.1.11 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › MAP3K_TRAF_bd 0.64 47.0 3.49e-01 80.4% 90.4%
3640751 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 53.0 3.69e-01 100.0% 87.1%
D2 high residues 70-129
PDB
Domain cluster: rep: MT735629.1__QNJ59188.1__X__00084__D44-99
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.76 66.0 4.69e-01 96.7% 35.6%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 45.0 4.41e-01 71.7% 58.5%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.72 62.0 4.90e-01 96.7% 84.7%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.70 59.0 4.31e-01 95.0% 34.3%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.70 59.0 4.72e-01 96.7% 84.7%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.69 60.0 5.01e-01 98.3% 57.1%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.68 57.0 4.34e-01 95.0% 61.2%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.67 56.0 4.74e-01 96.7% 58.7%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.66 57.0 4.97e-01 98.3% 63.4%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 53.0 4.66e-01 98.3% 58.9%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 51.0 4.71e-01 96.7% 65.8%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 54.0 3.57e-01 100.0% 23.0%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 51.0 4.43e-01 100.0% 55.8%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 45.0 3.16e-01 93.3% 22.9%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 54.0 3.66e-01 93.3% 27.6%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 55.0 3.48e-01 100.0% 38.1%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 51.0 3.43e-01 100.0% 22.7%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 49.0 4.46e-01 93.3% 64.2%
2gmqA00 2.40.450.10 Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain 0.62 50.0 4.37e-01 95.0% 67.7%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 50.0 4.27e-01 98.3% 54.5%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.62 54.0 4.68e-01 100.0% 64.2%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.61 47.0 4.20e-01 95.0% 57.1%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 45.0 4.25e-01 95.0% 64.5%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.61 46.0 3.56e-01 91.7% 37.7%
4uhvA01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.60 49.0 3.51e-01 95.0% 34.4%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.60 47.0 3.45e-01 95.0% 31.5%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.60 53.0 3.86e-01 100.0% 45.8%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.60 51.0 4.49e-01 100.0% 62.5%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.60 49.0 3.73e-01 91.7% 59.7%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 48.0 4.16e-01 93.3% 57.8%
2ddzE00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 47.0 3.46e-01 93.3% 68.4%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 48.0 4.39e-01 95.0% 67.1%
4ofdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 47.0 4.07e-01 100.0% 55.8%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 47.0 3.52e-01 95.0% 58.7%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 4.23e-01 93.3% 59.2%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 46.0 4.20e-01 93.3% 61.9%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.23e-01 98.3% 57.0%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 4.31e-01 95.0% 60.8%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 46.0 4.09e-01 93.3% 59.1%
4m3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 43.0 3.19e-01 98.3% 29.6%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 51.0 4.26e-01 96.7% 70.6%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 4.13e-01 93.3% 68.6%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 47.0 4.07e-01 98.3% 55.0%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.58 49.0 3.24e-01 93.3% 73.9%
3f8uD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 48.0 4.06e-01 100.0% 53.8%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.11e-01 93.3% 58.4%
4d70A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.58 49.0 3.63e-01 95.0% 53.8%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.04e-01 91.7% 59.2%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 3.99e-01 91.7% 56.9%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.21e-01 98.3% 64.7%
3tx8A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 50.0 4.07e-01 98.3% 73.7%
4lrzE02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 45.0 4.06e-01 93.3% 98.9%
3e3pA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 48.0 4.46e-01 95.0% 75.6%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 4.08e-01 100.0% 53.6%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 3.82e-01 100.0% 79.9%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 45.0 4.08e-01 93.3% 62.7%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 50.0 3.97e-01 98.3% 75.4%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.01e-01 95.0% 77.5%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 49.0 4.04e-01 100.0% 55.0%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 3.78e-01 96.7% 55.8%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.56 46.0 3.48e-01 93.3% 43.1%
1lp9E02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.77e-01 98.3% 62.5%
7s7rA01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.51e-01 95.0% 49.3%
4x28C02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.54 44.0 3.79e-01 93.3% 58.4%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.54 41.0 3.49e-01 93.3% 45.7%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.84e-01 100.0% 55.8%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 3.99e-01 95.0% 63.0%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.53 41.0 3.51e-01 93.3% 50.5%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 3.67e-01 96.7% 73.1%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 42.0 3.67e-01 95.0% 68.0%
1tvdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.58e-01 95.0% 87.9%
2kczA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.16e-01 93.3% 69.0%
1sq2N00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.44e-01 91.7% 53.6%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 44.0 3.60e-01 100.0% 78.9%
7altB01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 42.0 3.22e-01 100.0% 98.7%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5066224 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.79 54.0 4.70e-01 81.7% 47.8%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.77 65.0 5.28e-01 95.0% 60.0%
4889790 3071.1.1.7 ↗ a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.77 63.0 4.50e-01 90.0% 31.9%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 64.0 4.98e-01 95.0% 53.8%
3817267 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.75 57.0 4.93e-01 83.3% 82.1%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.75 56.0 5.18e-01 80.0% 68.0%
3187986 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.74 64.0 5.34e-01 96.7% 56.2%
3945543 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 64.0 5.66e-01 100.0% 67.1%
1144777 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.74 57.0 4.79e-01 85.0% 76.0%
4094235 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.74 65.0 5.09e-01 98.3% 51.2%
3646876 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.73 57.0 4.91e-01 85.0% 83.2%
5054112 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.35e-01 81.7% 87.7%
3589736 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 62.0 5.89e-01 95.0% 81.4%
4608778 1.1.7.107 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.72 62.0 4.93e-01 96.7% 49.2%
4402697 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.71 61.0 4.96e-01 98.3% 53.3%
3909822 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 60.0 4.95e-01 95.0% 70.0%
3997130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 52.0 4.43e-01 81.7% 48.0%
4944212 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.70 58.0 5.12e-01 95.0% 63.6%
3166182 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.70 61.0 5.33e-01 98.3% 66.7%
4299010 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 59.0 5.13e-01 96.7% 61.1%
3791752 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.97e-01 83.3% 72.3%
3970513 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.69 60.0 5.37e-01 98.3% 69.4%
5078127 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 59.0 5.24e-01 95.0% 100.0%
3797512 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.68 54.0 3.65e-01 91.7% 23.6%
4538400 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.67 56.0 4.46e-01 96.7% 53.1%
3387966 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 57.0 5.09e-01 95.0% 67.1%
4391792 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.67 55.0 4.79e-01 93.3% 61.1%
5056723 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 58.0 5.03e-01 100.0% 64.2%
3967986 4.7.1.2 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.66 47.0 4.32e-01 76.7% 65.0%
5064178 1.1.13.73 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA 0.65 50.0 5.06e-01 91.7% 86.7%
4040055 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.65 45.0 4.64e-01 76.7% 77.6%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 4.15e-01 88.3% 45.2%
4429351 325.1.7.8 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RnfC_N 0.64 54.0 4.98e-01 96.7% 91.3%
4033714 1.1.13.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.64 53.0 4.62e-01 95.0% 63.2%
3219409 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.37e-01 85.0% 56.7%
4018672 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.64 51.0 4.17e-01 90.0% 87.0%
3599223 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.64 53.0 4.44e-01 96.7% 65.5%
4868829 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.63 52.0 4.19e-01 93.3% 70.2%
3945834 1.1.7.79 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND 0.63 55.0 4.64e-01 98.3% 67.0%
4995896 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 54.0 4.18e-01 96.7% 50.0%
3445182 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 50.0 4.00e-01 95.0% 43.2%
3546177 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.62 52.0 3.49e-01 93.3% 28.5%
3386803 1.1.7.79 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND 0.62 54.0 4.58e-01 98.3% 67.0%
3569505 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.62 49.0 4.22e-01 98.3% 54.7%
3853561 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.62 49.0 4.27e-01 98.3% 57.8%
3949052 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 48.0 4.41e-01 95.0% 64.4%
4199516 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 4.26e-01 100.0% 53.3%
3701068 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 48.0 4.38e-01 93.3% 65.0%
4945600 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.60 52.0 4.14e-01 98.3% 100.0%
5055336 1.1.8.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 0.60 50.0 4.43e-01 96.7% 66.7%
3489566 2487.1.1.1 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Cpn60_TCP1 0.60 48.0 3.65e-01 100.0% 93.3%
4030511 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 53.0 4.17e-01 100.0% 48.0%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 40.0 3.87e-01 71.7% 64.3%
4452931 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 46.0 4.03e-01 93.3% 63.8%
4070516 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 46.0 4.21e-01 93.3% 65.0%
5051220 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 46.0 4.16e-01 95.0% 62.2%
3725596 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.58 48.0 3.90e-01 96.7% 46.4%
3593152 2011.1.1.0 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases 0.57 50.0 3.03e-01 100.0% 14.5%
3876835 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.57 50.0 3.88e-01 98.3% 62.3%
3699728 878.1.1.0 ↗ a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 0.57 48.0 3.91e-01 98.3% 74.2%
4966530 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.56 46.0 4.48e-01 96.7% 82.9%
3260242 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.05e-01 95.0% 65.3%
3591216 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 46.0 4.10e-01 93.3% 64.7%
5051461 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 46.0 3.38e-01 96.7% 47.1%
3997303 101.1.2.163 ↗ alpha arrays › HTH › HTH › winged helix domain › PMT2_N 0.54 43.0 3.22e-01 90.0% 37.0%
3409825 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.54 45.0 3.65e-01 95.0% 61.7%
4330191 304.102.1.0 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase 0.54 45.0 3.14e-01 95.0% 32.9%
5053322 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 46.0 3.55e-01 100.0% 55.2%
4964662 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.53 45.0 3.70e-01 100.0% 80.0%
3528559 10.32.1.1 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B 0.53 45.0 3.31e-01 100.0% 39.4%
4254454 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.52 41.0 2.86e-01 93.3% 41.6%
3428351 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.52 43.0 3.11e-01 96.7% 49.7%
4649925 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.52 41.0 2.96e-01 93.3% 32.2%
4471982 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 44.0 3.01e-01 98.3% 37.0%
3720173 2011.1.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14 0.52 43.0 2.59e-01 96.7% 13.1%
3265710 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.61e-01 95.0% 67.1%
3376254 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 42.0 3.80e-01 91.7% 78.8%
4048741 375.1.1.14 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L32p 0.51 31.0 3.04e-01 90.0% 53.8%
4927410 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.51 42.0 2.93e-01 98.3% 39.1%
4238046 3112.1.1.1 ↗ beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP 0.51 40.0 3.96e-01 93.3% 84.4%