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MK510991.1__QBI78851.1__X__00024
Bact-VirMK510991.1__QBI78851.1__X__00024
Identity
- Accession:
- MK510991 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
TaxID: 2563493
Cluster
View cluster (19 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 136-293
Domain cluster:
rep: KX077896.1__ANM47701.1__X__00070__D117-246_318-381
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01609.28 best | DDE_Tnp_1 | 119.1 | 3.10e-34 | 100.0% | 89.0% |
| PF13612.13 | DDE_Tnp_1_3 | 27.4 | 4.30e-06 | 90.5% | 67.7% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3obyA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.63 | 37.0 | 4.34e-01 | 89.9% | 82.6% |
| 6oziB00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.63 | 56.0 | 4.84e-01 | 96.2% | 86.3% |
| 1bcoA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 54.0 | 4.75e-01 | 100.0% | 73.0% |
| 7pikC01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 50.0 | 4.52e-01 | 98.7% | 72.0% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.56 | 33.0 | 4.00e-01 | 87.3% | 90.2% |
| 4py5A02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 51.0 | 4.71e-01 | 100.0% | 95.9% |
| 1dxlA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.53 | 27.0 | 3.10e-01 | 98.1% | 64.5% |
| 2qaiB00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.51 | 29.0 | 3.66e-01 | 94.3% | 95.6% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4010299 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.97 | 95.0 | 7.26e-01 | 100.0% | 51.0% |
| 5005232 | 2484.1.1.332 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF772 | 0.82 | 75.0 | 5.97e-01 | 100.0% | 52.2% |
| 4992937 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.82 | 78.0 | 5.84e-01 | 100.0% | 63.2% |
| 3590948 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.80 | 72.0 | 5.93e-01 | 100.0% | 57.3% |
| 3587332 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 71.0 | 5.69e-01 | 100.0% | 52.6% |
| 3509891 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.78 | 73.0 | 5.49e-01 | 100.0% | 78.9% |
| 4961486 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 73.0 | 5.35e-01 | 100.0% | 60.0% |
| 5006321 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 73.0 | 5.59e-01 | 100.0% | 57.1% |
| 4932086 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.77 | 66.0 | 6.02e-01 | 100.0% | 70.5% |
| 3942981 | 2484.1.1.269 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 | 0.76 | 71.0 | 5.30e-01 | 100.0% | 59.2% |
| 5019203 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 67.0 | 5.82e-01 | 100.0% | 64.3% |
| 5002528 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 70.0 | 5.79e-01 | 100.0% | 59.2% |
| 4961488 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 71.0 | 5.15e-01 | 100.0% | 55.2% |
| 5020443 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.75 | 71.0 | 5.63e-01 | 100.0% | 55.6% |
| 5019257 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 71.0 | 5.65e-01 | 100.0% | 79.0% |
| 3905705 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.75 | 71.0 | 6.52e-01 | 100.0% | 84.1% |
| 4958315 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 71.0 | 5.58e-01 | 100.0% | 54.0% |
| 4961867 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 70.0 | 5.17e-01 | 100.0% | 57.4% |
| 4594347 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 70.0 | 5.02e-01 | 100.0% | 55.2% |
| 4269616 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 70.0 | 4.89e-01 | 100.0% | 54.8% |
| 4328684 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.74 | 70.0 | 4.94e-01 | 100.0% | 52.7% |
| 5060820 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.73 | 68.0 | 4.80e-01 | 100.0% | 58.3% |
| 4008870 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 68.0 | 5.02e-01 | 100.0% | 53.6% |
| 5070929 | 2484.1.1.332 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF772 | 0.73 | 69.0 | 5.41e-01 | 100.0% | 54.5% |
| 4315503 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.72 | 69.0 | 5.14e-01 | 100.0% | 54.4% |
| 4958657 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.72 | 51.0 | 5.22e-01 | 72.2% | 79.4% |
| 4149684 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.72 | 68.0 | 5.57e-01 | 100.0% | 72.6% |
| 4954372 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.72 | 68.0 | 5.46e-01 | 100.0% | 58.2% |
| 3270453 | 2484.1.1.120 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 | 0.72 | 58.0 | 6.20e-01 | 98.1% | 95.7% |
| 3949341 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 68.0 | 5.50e-01 | 100.0% | 59.3% |
| 3970986 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 67.0 | 5.23e-01 | 100.0% | 51.6% |
| 4518542 | 2484.1.1.146 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_Tn3 | 0.70 | 66.0 | 5.08e-01 | 100.0% | 48.0% |
| 4962044 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.70 | 61.0 | 4.98e-01 | 100.0% | 53.3% |
| 4974444 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.70 | 60.0 | 4.93e-01 | 100.0% | 53.6% |
| 5040335 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.69 | 66.0 | 5.94e-01 | 100.0% | 77.6% |
| 5027997 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.69 | 65.0 | 5.43e-01 | 100.0% | 62.5% |
| 4514424 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.69 | 65.0 | 5.08e-01 | 100.0% | 53.9% |
| 4940124 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.68 | 65.0 | 5.10e-01 | 100.0% | 53.5% |
| 5008722 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 62.0 | 4.92e-01 | 100.0% | 50.5% |
| 5005291 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.66 | 61.0 | 5.38e-01 | 100.0% | 70.5% |
| 4632712 | 2484.1.1.219 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29688 | 0.65 | 56.0 | 5.10e-01 | 100.0% | 70.2% |
| 5017867 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.63 | 53.0 | 5.24e-01 | 100.0% | 83.4% |
| 5019289 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 56.0 | 5.12e-01 | 98.7% | 100.0% |
| 2887749 | 2484.1.1.219 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29688 | 0.61 | 57.0 | 4.94e-01 | 100.0% | 67.7% |
| 5017705 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 56.0 | 4.50e-01 | 99.4% | 65.3% |
| 3238544 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.59 | 52.0 | 4.65e-01 | 100.0% | 68.0% |
| 3946848 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.59 | 34.0 | 4.04e-01 | 89.9% | 82.7% |
| 3938530 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.57 | 53.0 | 4.64e-01 | 100.0% | 69.3% |
| 3848684 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.57 | 53.0 | 4.54e-01 | 100.0% | 76.3% |
| 3924433 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 52.0 | 4.60e-01 | 100.0% | 69.3% |
| 3784775 | 2484.1.1.104 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_1 | 0.56 | 52.0 | 4.36e-01 | 100.0% | 69.8% |
| 3929141 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 52.0 | 4.55e-01 | 100.0% | 67.8% |
| 1837475 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.55 | 51.0 | 4.67e-01 | 100.0% | 93.5% |
| 3235509 | 3407.1.1.1 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › NOP5NT | 0.54 | 47.0 | 4.57e-01 | 97.5% | 84.1% |
| 3169999 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.53 | 35.0 | 3.53e-01 | 91.8% | 64.8% |
| 4209651 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.52 | 35.0 | 4.06e-01 | 86.1% | 93.9% |
| 3988559 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.52 | 34.0 | 3.81e-01 | 95.6% | 85.0% |
| 3773112 | 5.1.4.94 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 | 0.50 | 40.0 | 3.08e-01 | 83.5% | 58.3% |
D2
medium
residues 15-135_294-322
Domain cluster:
rep: IMGVR_UViG_638154508_000001-638154508-638178667__D20-139
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05598.17 best | DUF772 | 85.6 | 3.80e-24 | 63.3% | 92.9% |