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MK511014.1__QBI80913.1__X__00045
Bact-VirMK511014.1__QBI80913.1__X__00045
Identity
- Accession:
- MK511014 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
TaxID: 2563518
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-95
Domain cluster:
rep: MH268168.1__AWY10457.1__PFP1_07__00007__D2-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 58.4 | 1.20e-15 | 100.0% | 74.0% |
D2
high
residues 135-197
Domain cluster:
rep: AP014684.1__BAR92406.1__X__00068__D140-199
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 47.0 | 3.63e-01 | 76.2% | 68.8% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 57.0 | 5.01e-01 | 100.0% | 71.3% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.63 | 54.0 | 4.72e-01 | 100.0% | 76.0% |
| 2d2eA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 3.53e-01 | 93.7% | 27.2% |
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.62 | 43.0 | 3.77e-01 | 73.0% | 58.6% |
| 5cgaE00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 52.0 | 3.55e-01 | 100.0% | 26.3% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 43.0 | 4.03e-01 | 77.8% | 93.9% |
| 4aidA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.60 | 42.0 | 3.90e-01 | 74.6% | 72.0% |
| 2r6iA02 | 1.10.3580.10 | Mainly Alpha › Orthogonal Bundle › ATP12-like fold › ATP12 ATPase | 0.59 | 51.0 | 3.79e-01 | 100.0% | 61.0% |
| 2gttC01 | 1.10.3570.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like fold › Rhabdovirus nucleocapsid protein like domain | 0.59 | 51.0 | 3.67e-01 | 100.0% | 50.0% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.59 | 47.0 | 4.30e-01 | 100.0% | 67.4% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.55 | 46.0 | 3.78e-01 | 96.8% | 50.0% |
| 5kjpA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.55 | 43.0 | 4.43e-01 | 88.9% | 100.0% |
| 7wboA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 45.0 | 3.41e-01 | 98.4% | 39.4% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.55 | 40.0 | 3.43e-01 | 79.4% | 90.7% |
| 6wilA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 41.0 | 3.86e-01 | 96.8% | 64.3% |
| 2qvwB05 | 1.10.1740.150 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.54 | 35.0 | 3.38e-01 | 100.0% | 55.3% |
| 2yqdA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 45.0 | 3.74e-01 | 100.0% | 86.7% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 39.0 | 3.29e-01 | 77.8% | 74.0% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.51 | 36.0 | 3.32e-01 | 74.6% | 58.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589701 | 632.24.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor C-terminal domain › GBS CAMP factor C-terminal domain › ORF6C | 0.89 | 82.0 | 7.34e-01 | 100.0% | 83.5% |
| 4219640 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 68.0 | 3.90e-01 | 100.0% | 48.9% |
| 5070806 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.75 | 58.0 | 5.84e-01 | 100.0% | 84.6% |
| 4317663 | 148.1.1.13 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PCP_red | 0.75 | 59.0 | 6.24e-01 | 93.7% | 96.4% |
| 4364892 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.74 | 67.0 | 4.29e-01 | 100.0% | 93.6% |
| 4682562 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.74 | 66.0 | 4.70e-01 | 100.0% | 55.1% |
| 4394038 | 148.1.3.3 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PCP_red | 0.73 | 59.0 | 6.05e-01 | 96.8% | 91.7% |
| 5051292 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 55.0 | 5.24e-01 | 96.8% | 69.3% |
| 4589278 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.72 | 62.0 | 5.26e-01 | 96.8% | 95.2% |
| 5044325 | 4125.1.1.0 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like | 0.70 | 56.0 | 5.64e-01 | 90.5% | 92.3% |
| 3596205 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 61.0 | 5.32e-01 | 98.4% | 67.4% |
| 5084048 | 3831.1.1.15 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › HAAS | 0.68 | 60.0 | 5.45e-01 | 100.0% | 84.7% |
| 3512415 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.66 | 56.0 | 4.05e-01 | 93.7% | 34.3% |
| 4274954 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.65 | 47.0 | 4.43e-01 | 79.4% | 70.0% |
| 3265419 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.60 | 50.0 | 4.76e-01 | 100.0% | 82.5% |
| 4220382 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.59 | 47.0 | 3.98e-01 | 88.9% | 71.8% |
| 3980275 | 148.1.3.232 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF3418 | 0.59 | 51.0 | 3.99e-01 | 100.0% | 72.4% |
| 5055153 | 3290.1.1.0 ↗ | alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B | 0.59 | 41.0 | 3.85e-01 | 74.6% | 83.7% |
| 4846751 | 566.2.1.1 ↗ | alpha complex topology › P40 nucleoprotein-like › Rhabdovirus nucleocapsid protein › Rhabdovirus nucleocapsid protein › Rhabdo_ncap | 0.59 | 50.0 | 3.35e-01 | 100.0% | 35.1% |
| 3939027 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 49.0 | 2.99e-01 | 98.4% | 18.6% |
| 3326952 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.56 | 48.0 | 2.97e-01 | 100.0% | 92.8% |
| 4978611 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 48.0 | 3.44e-01 | 98.4% | 79.0% |
| 3281498 | 604.24.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C | 0.54 | 36.0 | 3.37e-01 | 76.2% | 52.5% |
| 2634195 | 2008.1.1.49 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_SinI | 0.54 | 45.0 | 3.07e-01 | 100.0% | 25.5% |
| 3451263 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.53 | 46.0 | 2.77e-01 | 100.0% | 26.6% |
| 3743101 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.52 | 43.0 | 4.09e-01 | 98.4% | 81.3% |
D3
high
residues 219-288
Domain cluster:
rep: ON778006.1__UVD41299.1__X__00001__D209-278