←Back to structures
MK511036.1__QBI82230.1__X__00059
Bact-VirMK511036.1__QBI82230.1__X__00059
Identity
- Accession:
- MK511036 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
TaxID: 2563530
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-97
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b8fA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.87 | 69.0 | 4.21e-01 | 90.0% | 16.0% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.62 | 42.0 | 3.45e-01 | 71.7% | 45.8% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.60 | 41.0 | 3.97e-01 | 81.7% | 63.2% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 37.0 | 3.41e-01 | 83.3% | 49.4% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.56 | 45.0 | 3.99e-01 | 98.3% | 59.8% |
| 1bccH00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.53 | 43.0 | 4.25e-01 | 98.3% | 86.4% |
| 2ynmC03 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 42.0 | 3.56e-01 | 98.3% | 86.2% |
| 2q9rA01 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.53 | 45.0 | 3.22e-01 | 98.3% | 35.9% |
| 2nr9A00 | 1.20.1540.10 | Mainly Alpha › Up-down Bundle › Rhomboid-like fold › Rhomboid-like | 0.53 | 38.0 | 2.75e-01 | 78.3% | 53.6% |
| 4zi3D00 | 1.20.1520.10 | Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain | 0.53 | 43.0 | 3.50e-01 | 100.0% | 45.3% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 42.0 | 3.30e-01 | 91.7% | 73.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973685 | 602.1.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like | 0.94 | 73.0 | 4.46e-01 | 81.7% | 16.1% |
| 5035084 | 3567.1.1.189 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › Lyase_aromatic | 0.89 | 71.0 | 4.36e-01 | 85.0% | 16.8% |
| 4214949 | 602.1.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_aromatic | 0.86 | 72.0 | 4.40e-01 | 90.0% | 17.1% |
| 5038323 | 602.1.1.3 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_aromatic | 0.85 | 70.0 | 4.31e-01 | 90.0% | 17.1% |
| 4176828 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 44.0 | 4.24e-01 | 75.0% | 84.3% |
| 3426064 | 11.1.1.855 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26102 | 0.61 | 44.0 | 3.31e-01 | 81.7% | 29.4% |
| 3214333 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 38.0 | 3.15e-01 | 71.7% | 63.5% |
| 3784238 | 3758.1.1.99 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Tht1 | 0.54 | 37.0 | 3.39e-01 | 88.3% | 50.6% |
| 3688868 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.54 | 37.0 | 3.36e-01 | 71.7% | 50.6% |
| 3730037 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.54 | 37.0 | 3.79e-01 | 71.7% | 78.2% |
| 3936634 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.53 | 43.0 | 2.79e-01 | 98.3% | 44.3% |
| 3580494 | 101.1.2.499 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 | 0.52 | 36.0 | 3.47e-01 | 75.0% | 62.9% |
| 3617979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.34e-01 | 83.3% | 60.0% |