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MK552140.1__QBX06449.1__BcepSaruman_036__00036
Bact-VirMK552140.1__QBX06449.1__BcepSaruman_036__00036
Identity
- Accession:
- MK552140 ↗
- Kingdom:
- phage
Quality
62.7
mean pLDDT
Taxonomy
TaxID: 2530032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-68
D2
medium
residues 74-116
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 61.0 | 5.25e-01 | 76.7% | 50.0% |
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.81 | 58.0 | 5.70e-01 | 76.7% | 72.3% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.75 | 53.0 | 4.51e-01 | 76.7% | 46.5% |
| 1t3dA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.74 | 56.0 | 3.90e-01 | 83.7% | 27.1% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.74 | 61.0 | 4.22e-01 | 95.3% | 64.2% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 53.0 | 4.75e-01 | 79.1% | 84.1% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 5.64e-01 | 97.7% | 84.7% |
| 3ljkA03 | 1.10.1390.10 | Mainly Alpha › Orthogonal Bundle › Phosphoglucose isomerase, C-terminal domain › | 0.71 | 52.0 | 5.42e-01 | 100.0% | 89.7% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 61.0 | 4.48e-01 | 100.0% | 73.1% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 56.0 | 5.36e-01 | 97.7% | 88.7% |
| 7jiuA03 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.67 | 56.0 | 3.90e-01 | 93.0% | 75.7% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 43.0 | 3.52e-01 | 76.7% | 35.2% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 53.0 | 4.23e-01 | 93.0% | 66.7% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.62 | 47.0 | 3.98e-01 | 83.7% | 49.3% |
| 2wdqC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.62 | 50.0 | 3.64e-01 | 90.7% | 76.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3815647 | 2003.1.5.220 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF26055 | 0.83 | 62.0 | 3.77e-01 | 86.0% | 13.2% |
| 3354298 | 558.1.1.0 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain | 0.75 | 66.0 | 6.29e-01 | 97.7% | 84.0% |
| None | — | 0.72 | 63.0 | 4.13e-01 | 100.0% | 51.7% | |
| 3510664 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.70 | 59.0 | 4.18e-01 | 100.0% | 83.6% |
| 3254515 | 6039.1.1.0 ↗ | few secondary structure elements › CLIP domain › CLIP domain › CLIP domain | 0.69 | 55.0 | 5.44e-01 | 86.0% | 91.1% |