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MK552140.1__QBX06642.1__BcepSaruman_229__00229
Bact-VirMK552140.1__QBX06642.1__BcepSaruman_229__00229
Identity
- Accession:
- MK552140 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 2530032
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-166
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22945.3 best | LEM-3_GIY-YIG | 45.6 | 1.10e-11 | 68.7% | 64.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zo9B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 23.0 | 2.91e-01 | 72.9% | 57.9% |
| 6rawN02 | 3.40.5.60 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.58 | 22.0 | 3.42e-01 | 77.7% | 96.4% |
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 29.0 | 3.28e-01 | 97.6% | 64.0% |
| 5dnlA02 | 3.30.230.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Imidazole glycerol phosphate dehydratase; domain 1 | 0.54 | 22.0 | 2.78e-01 | 89.8% | 58.4% |
| 2ztbA02 | 2.60.40.4280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 27.0 | 3.42e-01 | 80.1% | 83.8% |
| 3zm8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 26.0 | 2.95e-01 | 77.7% | 60.6% |
| 2z15A00 | 3.90.640.90 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain | 0.51 | 30.0 | 3.47e-01 | 80.7% | 80.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963488 | 821.1.1.7 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG | 0.84 | 51.0 | 6.14e-01 | 70.5% | 87.8% |
| 3215217 | 821.1.1.7 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG | 0.78 | 60.0 | 6.02e-01 | 88.0% | 78.2% |
| 3622050 | 821.1.1.7 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG | 0.77 | 63.0 | 5.96e-01 | 88.0% | 72.3% |
| 3404363 | 821.1.1.7 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG | 0.72 | 61.0 | 5.90e-01 | 88.0% | 79.9% |
| 86559 | 4072.1.1.1 ↗ | a+b complex topology › BTG domain-like › BTG domain-like › BTG domain-like › BTG | 0.60 | 29.0 | 3.43e-01 | 86.7% | 65.0% |
| 2418779 | 10.2.1.60 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › STIV_penton_2nd | 0.54 | 23.0 | 3.08e-01 | 77.7% | 71.6% |