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MK552141.1__QBQ74647.1__BcepSauron_267__00267
Bact-VirMK552141.1__QBQ74647.1__BcepSauron_267__00267
Identity
- Accession:
- MK552141 ↗
- Kingdom:
- phage
Quality
66.2
mean pLDDT
Taxonomy
TaxID: 2530033
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-150
Domain cluster:
rep: ON615601.1__UTS51982.1__X__00034__D5-121
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12571.14 best | Phage_tail_fib | 30.9 | 3.50e-07 | 97.1% | 85.3% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.66 | 27.0 | 3.36e-01 | 89.9% | 58.6% |
| 4adiB04 | 2.60.40.2650 | Mainly Beta › Sandwich › Immunoglobulin-like › Rubella membrane glycoprotein E1, domain 3 | 0.56 | 32.0 | 3.87e-01 | 78.4% | 87.4% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 4.04e-01 | 74.8% | 91.6% |
| 1x1iA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 33.0 | 3.55e-01 | 74.1% | 70.3% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.53 | 34.0 | 3.56e-01 | 100.0% | 70.6% |
| 6ncyA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 37.0 | 3.38e-01 | 73.4% | 90.1% |
| 1ej8A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.52 | 41.0 | 4.13e-01 | 83.5% | 98.6% |
| 4oq1A01 | 2.60.40.4180 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.94e-01 | 75.5% | 86.8% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.50 | 32.0 | 3.10e-01 | 88.5% | 56.9% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 34.0 | 3.50e-01 | 97.1% | 72.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928608 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.86 | 71.0 | 6.74e-01 | 89.2% | 74.2% |
| 4932865 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.82 | 69.0 | 6.98e-01 | 88.5% | 89.3% |
| 3439157 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.65 | 49.0 | 4.24e-01 | 78.4% | 86.7% |
| 3595234 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 40.0 | 4.46e-01 | 77.7% | 87.3% |
| 4542564 | 11.1.1.1059 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3, Ig_3 | 0.59 | 44.0 | 3.16e-01 | 77.0% | 78.3% |
| 3607823 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 40.0 | 4.51e-01 | 77.7% | 91.4% |
| 4983910 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 33.0 | 3.46e-01 | 97.1% | 63.8% |
| 3315951 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.54 | 27.0 | 3.50e-01 | 90.6% | 83.5% |
| 3212872 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 3.94e-01 | 88.5% | 83.5% |
| 3794160 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 34.0 | 3.60e-01 | 75.5% | 72.8% |
| 3575581 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.51 | 32.0 | 3.05e-01 | 95.0% | 52.1% |
| 3436556 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.50 | 28.0 | 3.48e-01 | 84.2% | 94.7% |
D2
medium
residues 151-318
Domain cluster:
rep: AB366653.2__BAG41619.2__X__00171__D152-272
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.62 | 34.0 | 4.37e-01 | 72.6% | 95.7% |
| 1ep5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 29.0 | 3.89e-01 | 75.6% | 89.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4214180 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.66 | 38.0 | 4.81e-01 | 72.6% | 98.9% |
| 4682440 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 37.0 | 4.64e-01 | 79.2% | 100.0% |
| 4230122 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 34.0 | 4.28e-01 | 76.8% | 90.0% |
D3
medium
residues 469-581