Back to structures

MK552141.1__QBQ74655.1__BcepSauron_275__00275

Bact-Vir

MK552141.1__QBQ74655.1__BcepSauron_275__00275

Identity

Accession:
MK552141 ↗
Kingdom:
phage

Quality

78.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-143
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mtmA01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 53.0 5.14e-01 98.8% 84.4%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.62 54.0 4.47e-01 98.8% 58.0%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 4.38e-01 100.0% 92.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.06e-01 100.0% 70.5%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.61 49.0 3.84e-01 100.0% 40.1%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.94e-01 100.0% 83.3%
3vynA01 2.60.40.3780 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 48.0 4.80e-01 98.8% 85.1%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 45.0 4.47e-01 87.2% 77.5%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.59 52.0 4.35e-01 98.8% 60.4%
3isrA02 2.60.40.2250 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 46.0 4.41e-01 100.0% 77.0%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 46.0 3.62e-01 98.8% 42.0%
5v00B01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 4.32e-01 97.7% 86.6%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 4.37e-01 98.8% 76.4%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.54 45.0 3.38e-01 97.7% 71.8%
7k7jA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.09e-01 90.7% 85.2%
4cu7A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 47.0 3.82e-01 100.0% 94.1%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 3.37e-01 81.4% 60.3%
8d7eC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 4.19e-01 89.5% 86.9%
1o9zA00 2.60.40.1410 Mainly Beta › Sandwich › Immunoglobulin-like › Bacterial adhesins - F17c-type 0.53 45.0 3.76e-01 100.0% 84.1%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 39.0 3.90e-01 90.7% 75.6%
1ok0A00 2.60.40.20 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor 0.53 38.0 4.01e-01 88.4% 89.2%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 44.0 3.96e-01 98.8% 65.6%
1o4tA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 44.0 4.06e-01 100.0% 70.4%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 44.0 3.65e-01 97.7% 59.3%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 4.47e-01 96.5% 100.0%
3v4vB01 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.52 38.0 3.44e-01 100.0% 53.1%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 4.21e-01 100.0% 98.2%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 39.0 3.06e-01 88.4% 83.1%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 42.0 3.85e-01 96.5% 66.4%
4ktpA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.50 43.0 3.18e-01 98.8% 73.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228695 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.67 57.0 4.71e-01 95.3% 97.4%
3604637 4182.1.1.3 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C 0.65 57.0 5.25e-01 98.8% 73.9%
5083968 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 56.0 5.00e-01 98.8% 100.0%
4027527 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.64 53.0 5.39e-01 100.0% 92.9%
1714453 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.64 56.0 5.47e-01 100.0% 96.8%
5069410 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.64 52.0 4.02e-01 100.0% 39.5%
5005733 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.64 55.0 4.38e-01 96.5% 56.7%
3705988 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.64 48.0 5.20e-01 96.5% 100.0%
4942929 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 54.0 5.18e-01 96.5% 100.0%
3574740 10.30.1.1 beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain › Gal_Lectin 0.62 51.0 4.71e-01 93.0% 100.0%
5078522 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.61 52.0 4.92e-01 96.5% 96.2%
4929284 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.61 48.0 4.04e-01 96.5% 50.0%
3530838 4182.1.1.7 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Mucin2_WxxW 0.61 52.0 5.29e-01 96.5% 100.0%
5055413 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.60 54.0 4.71e-01 100.0% 74.6%
3742853 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.59 50.0 3.96e-01 98.8% 43.7%
3611624 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.18e-01 90.7% 91.9%
3868286 12.1.1.61 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Mucin2_WxxW 0.59 50.0 5.11e-01 97.7% 100.0%
3901741 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.58 50.0 4.30e-01 100.0% 92.4%
3491160 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 51.0 4.28e-01 100.0% 63.3%
3236803 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.58 50.0 4.73e-01 97.7% 99.0%
3661818 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 47.0 4.38e-01 93.0% 81.8%
3907282 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.57 48.0 4.13e-01 98.8% 57.2%
3401442 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.56 45.0 3.97e-01 98.8% 57.0%
4100007 10.32.1.51 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 0.56 47.0 4.24e-01 98.8% 66.7%
4943875 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 4.13e-01 97.7% 57.2%
3353531 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 48.0 4.18e-01 98.8% 81.4%
5056882 4081.1.1.12 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.56 48.0 3.72e-01 97.7% 84.4%
1165730 10.20.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N_2 0.56 47.0 4.51e-01 98.8% 79.2%
5039235 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 48.0 4.51e-01 100.0% 82.7%
2772049 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.55 47.0 4.11e-01 100.0% 60.7%
5054280 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.56e-01 97.7% 92.6%
4189335 11.1.5.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 0.55 40.0 4.07e-01 100.0% 81.0%
5084091 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.54 45.0 4.40e-01 100.0% 85.3%
3952750 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.54 44.0 4.26e-01 100.0% 78.0%
5060962 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 48.0 4.56e-01 100.0% 97.1%
4013356 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.53 46.0 3.84e-01 98.8% 54.4%
3657712 11.1.1.51 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.53 40.0 3.32e-01 82.6% 69.4%
4954606 10.1.2.186 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 0.53 46.0 4.08e-01 100.0% 83.8%
4997107 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.81e-01 97.7% 69.0%
5049074 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.53 46.0 4.05e-01 100.0% 70.9%
4241505 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 43.0 4.08e-01 93.0% 94.3%
5040902 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 45.0 4.09e-01 100.0% 75.0%
3534653 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.86e-01 96.5% 85.4%
1279841 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 39.0 4.23e-01 93.0% 100.0%
4675807 10.34.1.1 beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N 0.52 41.0 4.00e-01 91.9% 91.0%
3972395 101.1.2.847 alpha arrays › HTH › HTH › winged helix domain › GDH_ACT1 0.51 35.0 2.84e-01 70.9% 69.7%
4204303 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 37.0 3.72e-01 89.5% 73.3%
5012197 11.1.1.138 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc 0.51 43.0 4.02e-01 100.0% 87.0%
3757265 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 41.0 4.00e-01 94.2% 81.0%
3255728 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 3.60e-01 94.2% 74.8%
5081066 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.94e-01 96.5% 87.3%
5027089 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 4.00e-01 98.8% 87.3%
5014961 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 39.0 3.84e-01 96.5% 78.9%
D2 medium residues 1-53
PDB
Domain cluster: representative