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MK552327.1__QBJ02554.1__PSA21_24__00024
Bact-VirMK552327.1__QBJ02554.1__PSA21_24__00024
Identity
- Accession:
- MK552327 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Taxonomy
TaxID: 2530023
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-72
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.81 | 58.0 | 5.47e-01 | 74.2% | 68.8% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.78 | 57.0 | 4.39e-01 | 83.3% | 35.7% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.77 | 56.0 | 4.54e-01 | 77.3% | 41.1% |
| 6e1kA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 59.0 | 4.89e-01 | 81.8% | 77.7% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 52.0 | 4.81e-01 | 71.2% | 86.6% |
| 2iieA01 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.70 | 51.0 | 4.32e-01 | 77.3% | 56.5% |
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.70 | 44.0 | 3.66e-01 | 71.2% | 37.5% |
| 2c5iT00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 50.0 | 4.36e-01 | 78.8% | 57.4% |
| 4evxA00 | 1.10.1740.240 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.61 | 47.0 | 4.21e-01 | 84.8% | 82.5% |
| 1zjcA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.61 | 47.0 | 3.43e-01 | 83.3% | 87.8% |
| 1n5uA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.59 | 41.0 | 3.61e-01 | 74.2% | 46.6% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 38.0 | 2.56e-01 | 75.8% | 17.0% |
| 2e1qC10 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 39.0 | 3.18e-01 | 78.8% | 39.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583674 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.88 | 63.0 | 4.93e-01 | 74.2% | 60.0% |
| 3960463 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.85 | 59.0 | 6.15e-01 | 71.2% | 80.0% |
| 3588902 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.84 | 64.0 | 4.91e-01 | 80.3% | 38.6% |
| 3869172 | 5000.3.1.0 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death | 0.84 | 59.0 | 4.31e-01 | 77.3% | 30.0% |
| 3742957 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.78 | 51.0 | 5.36e-01 | 71.2% | 75.0% |
| 3741476 | 101.1.2.527 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_RGF3 | 0.78 | 52.0 | 4.45e-01 | 74.2% | 45.0% |
| 1137424 | 274.1.1.22 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PilJ_Pilin | 0.77 | 55.0 | 5.15e-01 | 74.2% | 66.3% |
| 3970007 | 3502.1.1.0 ↗ | alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein | 0.76 | 55.0 | 5.28e-01 | 75.8% | 84.0% |
| 3657981 | 198.1.1.16 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › HTH_70 | 0.73 | 51.0 | 4.80e-01 | 77.3% | 60.0% |
| 3248213 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.72 | 55.0 | 3.64e-01 | 81.8% | 48.8% |
| 3679373 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 49.0 | 4.95e-01 | 74.2% | 72.3% |
| 5046197 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.70 | 61.0 | 4.02e-01 | 100.0% | 56.9% |
| 3327699 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.68 | 46.0 | 5.10e-01 | 74.2% | 94.0% |
| 4858006 | 191.1.1.11 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_7 | 0.67 | 56.0 | 5.40e-01 | 95.5% | 83.1% |
| 3651508 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 45.0 | 4.67e-01 | 75.8% | 78.3% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 4.71e-01 | 84.8% | 80.0% |