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MK552327.1__QBJ02559.1__PSA21_29__00029
Bact-VirMK552327.1__QBJ02559.1__PSA21_29__00029
Identity
- Accession:
- MK552327 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Taxonomy
TaxID: 2530023
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-99
Domain cluster:
rep: BML_coassembly_scaffold_50_prodigal-single.1__X__X__00150__D68-150
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.60 | 46.0 | 3.80e-01 | 83.3% | 67.5% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 42.0 | 3.74e-01 | 82.2% | 67.4% |
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.50 | 35.0 | 3.36e-01 | 73.3% | 87.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4986716 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 50.0 | 4.06e-01 | 95.6% | 72.4% |
| 1649062 | 219.1.1.43 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase | 0.57 | 42.0 | 3.09e-01 | 78.9% | 83.1% |
| 3955210 | 2008.1.1.60 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat_2 | 0.54 | 42.0 | 3.49e-01 | 84.4% | 78.2% |
| 4616175 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.52 | 36.0 | 3.22e-01 | 74.4% | 75.0% |
| 1179397 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.51 | 45.0 | 3.77e-01 | 100.0% | 62.2% |
| 3288140 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.51 | 35.0 | 3.27e-01 | 73.3% | 77.5% |
D2
high
residues 103-238
Domain cluster:
rep: NC_041911.1__YP_009598961.1__FDH28_gp153__00268__D73-218