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MK552327.1__QBJ02929.1__PSA21_405__00403

Bact-Vir

MK552327.1__QBJ02929.1__PSA21_405__00403

Identity

Accession:
MK552327 ↗
Kingdom:
phage

Quality

96.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Tepukevirus› Pseudomonas_phage_Psa21

TaxID: 2530023

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-72_89-103_191-224
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.87 82.0 6.02e-01 99.2% 97.2%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.85 81.0 6.37e-01 98.3% 100.0%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.85 80.0 6.37e-01 100.0% 96.9%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.81 77.0 6.09e-01 100.0% 97.4%
3w9aA00 2.60.120.1160 Mainly Beta › Sandwich › Jelly Rolls › 0.65 61.0 4.76e-01 99.2% 92.4%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.55 47.0 3.77e-01 96.7% 87.7%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 45.0 3.28e-01 96.7% 67.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968513 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.86 81.0 6.33e-01 98.3% 100.0%
3006806 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.85 81.0 5.66e-01 100.0% 81.2%
2389074 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.85 80.0 6.02e-01 99.2% 100.0%
1095 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.85 80.0 6.37e-01 100.0% 96.9%
342906 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.81 76.0 6.00e-01 99.2% 96.5%
4065593 10.1.1.73 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26113 0.62 57.0 4.19e-01 100.0% 94.5%
4963509 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 32.0 3.43e-01 82.6% 74.0%
D2 medium residues 73-88_104-190
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08787.19 best Alginate_lyase2 32.2 1.30e-07 92.2% 38.2%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.87 84.0 6.26e-01 100.0% 54.1%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.83 78.0 5.86e-01 100.0% 51.5%
2zzjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.76 69.0 5.22e-01 100.0% 56.3%
3ecqA01 2.60.120.870 Mainly Beta › Sandwich › Jelly Rolls › 0.74 68.0 5.57e-01 100.0% 61.7%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 5.15e-01 100.0% 63.1%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 65.0 5.03e-01 100.0% 54.3%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 63.0 4.78e-01 100.0% 50.2%
2jj6A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 63.0 5.78e-01 100.0% 84.3%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.69 39.0 5.08e-01 94.2% 100.0%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 61.0 5.08e-01 100.0% 56.7%
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 61.0 5.10e-01 100.0% 58.3%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 4.73e-01 100.0% 57.4%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 59.0 4.60e-01 100.0% 55.6%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 58.0 4.63e-01 100.0% 51.2%
3o0wA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 4.54e-01 100.0% 50.4%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 4.78e-01 100.0% 61.2%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 4.88e-01 100.0% 60.2%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.64 49.0 3.54e-01 83.5% 90.1%
2uurA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 4.51e-01 100.0% 55.7%
3tojA01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 55.0 4.68e-01 100.0% 62.8%
2v73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 4.54e-01 100.0% 62.3%
3pvnA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 54.0 4.39e-01 100.0% 51.5%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 54.0 4.45e-01 100.0% 55.9%
8ew8A01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.58 52.0 3.99e-01 100.0% 48.3%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 48.0 3.13e-01 97.1% 87.0%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.56 47.0 3.47e-01 92.2% 39.7%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 43.0 2.94e-01 85.4% 97.8%
2iq1A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 43.0 3.24e-01 81.6% 96.1%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.55 45.0 3.04e-01 91.3% 94.1%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.54 47.0 3.22e-01 99.0% 98.3%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.53 44.0 4.33e-01 93.2% 94.0%
1av4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.53 46.0 3.13e-01 99.0% 94.1%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.53 43.0 3.97e-01 90.3% 95.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968513 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.93 89.0 6.58e-01 100.0% 55.2%
3058471 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.79 74.0 5.54e-01 100.0% 53.4%
3582226 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.73 68.0 5.27e-01 100.0% 58.6%
3800238 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.73 67.0 5.10e-01 100.0% 53.5%
3231481 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.73 67.0 5.18e-01 100.0% 56.7%
3577891 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.72 66.0 5.03e-01 100.0% 49.6%
3244250 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.72 65.0 4.81e-01 100.0% 44.9%
3207356 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.71 65.0 5.17e-01 100.0% 60.5%
3901910 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.70 63.0 5.21e-01 100.0% 64.3%
4960565 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 64.0 5.22e-01 100.0% 57.3%
3809268 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.70 63.0 4.71e-01 100.0% 69.0%
3949003 10.1.1.41 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.70 63.0 5.06e-01 100.0% 58.0%
3264222 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.69 62.0 4.69e-01 100.0% 47.6%
3914794 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.69 62.0 4.97e-01 100.0% 62.4%
416852 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.68 61.0 5.07e-01 100.0% 56.4%
3444338 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.68 61.0 4.54e-01 100.0% 44.2%
3577028 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.67 60.0 5.06e-01 100.0% 59.4%
3459130 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 60.0 4.45e-01 100.0% 44.4%
3827484 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 60.0 4.58e-01 100.0% 46.5%
4155618 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.66 60.0 4.77e-01 100.0% 51.2%
3404445 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 58.0 4.95e-01 100.0% 62.9%
3997908 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 58.0 4.84e-01 100.0% 60.0%
3215162 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 57.0 4.79e-01 100.0% 57.3%
3500010 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 58.0 4.46e-01 100.0% 64.3%
4662143 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.64 57.0 4.51e-01 100.0% 50.0%
3748155 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.64 57.0 4.61e-01 100.0% 55.0%
3875477 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.64 57.0 4.48e-01 100.0% 54.1%
3510202 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.63 50.0 4.24e-01 100.0% 52.1%
5061086 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.62 56.0 4.51e-01 100.0% 56.5%
5058743 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.61 54.0 4.44e-01 100.0% 52.8%
4880335 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.60 50.0 5.09e-01 95.1% 94.9%
4647654 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.59 53.0 5.09e-01 99.0% 100.0%
3372166 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.57 47.0 3.12e-01 92.2% 21.1%
3228032 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.57 47.0 4.62e-01 91.3% 95.5%
4979775 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 46.0 3.47e-01 92.2% 89.2%
3537640 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 44.0 3.06e-01 89.3% 45.6%
3110784 4056.1.1.4 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Head-tail_con 0.53 36.0 3.44e-01 99.0% 59.2%
4463771 3347.1.1.0 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 0.51 35.0 3.48e-01 100.0% 66.7%
3938953 11.1.1.835 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 0.51 39.0 3.40e-01 82.5% 70.0%
3220829 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.65e-01 82.5% 85.4%
3238330 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 2.96e-01 77.7% 84.5%