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MK560763.1__QBP06979.1__X__00046

Bact-Vir

MK560763.1__QBP06979.1__X__00046

Identity

Accession:
MK560763 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-31
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.83 69.0 4.58e-01 100.0% 88.5%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 64.0 4.68e-01 93.5% 34.9%
5fb0C01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 50.0 4.24e-01 100.0% 67.2%
3shgA00 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.52 45.0 2.74e-01 100.0% 63.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3809619 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.80 68.0 5.68e-01 100.0% 69.1%
3537307 377.1.1.34 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › FAM76 0.69 53.0 3.83e-01 96.8% 29.1%
4959344 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.68 55.0 3.38e-01 100.0% 15.5%
3209169 375.1.1.274 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ecl1 0.60 44.0 4.42e-01 93.5% 90.0%
3465422 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.58 41.0 2.86e-01 87.1% 18.9%
1063099 4040.1.1.1 alpha bundles › Fic-like › Fic-like › Fic-like › Fic 0.52 45.0 2.71e-01 100.0% 62.8%