←Back to structures

MK575466.1__QBJ01011.1__Rostov7_00075__00019

Bact-Vir

MK575466.1__QBJ01011.1__Rostov7_00075__00019

Identity

Accession:
MK575466 ↗
Kingdom:
phage

Quality

83.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_Rostov_7

TaxID: 2544946

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-129
PDB
Domain cluster: rep: MH238467.1__AWY03278.1__X__00011__D1-48_75-113
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gz4A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.92 88.0 7.25e-01 100.0% 71.0%
5tk8A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.84 71.0 5.97e-01 87.1% 74.3%
1xx7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.83 70.0 6.13e-01 87.1% 78.5%
1ynbA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.82 69.0 6.12e-01 87.9% 76.0%
4dmbB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.77 69.0 5.86e-01 94.4% 73.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 32.0 4.20e-01 89.5% 100.0%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.57 32.0 3.27e-01 87.9% 53.5%
2janA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.51 36.0 3.92e-01 77.4% 92.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4010813 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.97 93.0 8.09e-01 97.6% 73.5%
4790 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.92 88.0 7.25e-01 100.0% 71.0%
5024310 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.87 72.0 6.21e-01 86.3% 76.7%
5011113 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.84 70.0 6.17e-01 87.1% 77.1%
5065369 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.83 69.0 5.87e-01 87.1% 73.2%
3971047 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.82 68.0 5.91e-01 86.3% 75.6%
3176815 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.79 75.0 6.10e-01 100.0% 75.5%
3597759 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.78 70.0 5.82e-01 94.4% 72.0%
3389514 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.78 69.0 5.90e-01 94.4% 73.7%
5047096 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.76 69.0 5.68e-01 96.0% 70.2%
3798363 188.1.1.0 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain 0.64 52.0 4.20e-01 89.5% 94.4%
3960277 131.1.1.12 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_4 0.63 52.0 4.93e-01 86.3% 80.0%
3924171 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.60 50.0 3.98e-01 91.9% 89.1%
3221374 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.59 52.0 4.06e-01 99.2% 81.8%
3620215 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.58 34.0 3.01e-01 76.6% 36.8%
3241176 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.58 49.0 3.95e-01 92.7% 90.8%
3718035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 31.0 4.11e-01 77.4% 100.0%
3703396 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.55 43.0 3.62e-01 85.5% 47.6%
4032062 162.1.1.0 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.54 37.0 3.95e-01 100.0% 80.0%
3471832 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 4.18e-01 74.2% 100.0%
D2 high residues 151-223
PDB