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MK580972.1__QBP06444.1__X__00248

Bact-Vir

MK580972.1__QBP06444.1__X__00248

Identity

Accession:
MK580972 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Menderavirus› Stenotrophomonas_phage_YB07

TaxID: 2555548

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-53
PDB
Domain cluster: rep: Salt_Pond_R1_B_D2_MG_scaffold_4_prodigal-single.1__X__X__00493__D10-69
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.86 68.0 4.66e-01 100.0% 26.7%
1xebA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.86 68.0 4.61e-01 100.0% 26.2%
1darA05 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 71.0 5.77e-01 100.0% 50.6%
2nxcA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.84 72.0 4.91e-01 97.8% 28.8%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.82 71.0 5.28e-01 100.0% 39.5%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.79 66.0 5.52e-01 97.8% 100.0%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.77 66.0 6.19e-01 97.8% 87.7%
6aieA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.77 59.0 3.98e-01 100.0% 22.0%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.76 64.0 4.24e-01 100.0% 23.3%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.75 62.0 5.48e-01 100.0% 61.6%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.75 63.0 5.05e-01 97.8% 53.2%
2ip2A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 64.0 4.05e-01 100.0% 28.5%
1in0A02 3.30.70.990 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 0.75 63.0 5.17e-01 100.0% 97.8%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 62.0 4.53e-01 100.0% 35.3%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 60.0 5.37e-01 100.0% 62.9%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 64.0 4.31e-01 100.0% 27.4%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 63.0 4.33e-01 100.0% 28.5%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 64.0 4.38e-01 100.0% 28.9%
2m71A00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.73 62.0 4.95e-01 100.0% 58.2%
1dcjA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.73 62.0 5.27e-01 100.0% 56.8%
3by5A00 3.30.420.180 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain 0.73 63.0 4.61e-01 97.8% 99.2%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 62.0 4.27e-01 100.0% 33.7%
3e05B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 61.0 4.11e-01 100.0% 31.8%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 60.0 5.05e-01 100.0% 60.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.72 63.0 4.27e-01 100.0% 27.5%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 61.0 4.93e-01 97.8% 49.5%
5wt3A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 58.0 5.24e-01 93.5% 64.6%
2bsnA00 3.30.420.180 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain 0.72 61.0 4.41e-01 100.0% 92.3%
1j5uA01 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.72 60.0 4.60e-01 100.0% 97.4%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 58.0 5.03e-01 100.0% 60.8%
2lxrA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.71 59.0 5.13e-01 100.0% 63.2%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 58.0 3.91e-01 97.8% 27.1%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.69 58.0 5.10e-01 100.0% 65.3%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.69 53.0 3.34e-01 100.0% 14.6%
2yx1A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 55.0 5.02e-01 93.5% 65.2%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 56.0 4.86e-01 95.7% 60.3%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.68 55.0 4.34e-01 100.0% 40.5%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 57.0 4.66e-01 100.0% 54.7%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.68 55.0 4.68e-01 100.0% 64.0%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.67 55.0 3.79e-01 100.0% 24.6%
2w7vA00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.67 54.0 4.72e-01 100.0% 56.1%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.67 55.0 4.48e-01 100.0% 47.9%
3mtjA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 54.0 4.75e-01 100.0% 61.8%
3pm9A04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 54.0 4.53e-01 100.0% 57.5%
5suvC00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.65 52.0 4.03e-01 100.0% 98.4%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 53.0 4.13e-01 97.8% 44.7%
2joeA01 3.30.1830.10 Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like 0.64 52.0 3.97e-01 100.0% 43.8%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 50.0 4.17e-01 100.0% 48.3%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 51.0 4.40e-01 95.7% 56.8%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.64 53.0 4.00e-01 100.0% 88.0%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 51.0 4.59e-01 100.0% 66.2%
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.63 53.0 4.28e-01 97.8% 90.5%
4k59A00 2.60.40.4380 Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA 0.62 52.0 4.75e-01 100.0% 83.3%
5h5zA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 51.0 4.28e-01 100.0% 55.7%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 44.0 3.34e-01 82.6% 32.1%
4iscA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 49.0 3.53e-01 100.0% 28.8%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.61 52.0 3.81e-01 100.0% 36.1%
3gwmA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.61 49.0 3.77e-01 100.0% 97.7%
1tigA00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.60 48.0 4.12e-01 100.0% 59.1%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 47.0 4.21e-01 100.0% 58.7%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.60 47.0 4.34e-01 100.0% 72.9%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 47.0 4.14e-01 100.0% 61.0%
3g7uA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 48.0 3.35e-01 100.0% 28.4%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 43.0 2.93e-01 80.4% 18.9%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.59 51.0 3.30e-01 100.0% 29.5%
4ezeB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 48.0 3.00e-01 100.0% 16.3%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 47.0 3.21e-01 100.0% 22.3%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 48.0 3.52e-01 100.0% 36.8%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 44.0 4.09e-01 100.0% 69.1%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.56 43.0 3.76e-01 93.5% 81.2%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.50e-01 93.5% 57.4%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 3.17e-01 100.0% 30.1%
1ve3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 46.0 3.07e-01 97.8% 83.0%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.55 47.0 3.65e-01 100.0% 51.9%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 2.89e-01 100.0% 26.2%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 47.0 3.84e-01 100.0% 91.0%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 42.0 3.34e-01 100.0% 43.2%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.46e-01 93.5% 60.4%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 41.0 3.72e-01 100.0% 62.8%
3i3wA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.54 44.0 3.89e-01 100.0% 72.7%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.56e-01 95.7% 100.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.16e-01 84.8% 57.1%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.67e-01 100.0% 62.1%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.73e-01 93.5% 80.8%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.52 38.0 2.16e-01 84.8% 12.0%
8g3lE01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 42.0 2.94e-01 100.0% 63.5%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 44.0 3.69e-01 97.8% 95.1%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 43.0 3.60e-01 100.0% 71.8%
3d3yA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.50 43.0 2.78e-01 100.0% 38.7%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.06e-01 82.6% 69.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4652232 2003.1.5.55 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.82 74.0 4.76e-01 100.0% 23.6%
4669974 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.81 71.0 5.56e-01 100.0% 75.5%
4988529 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.80 67.0 5.58e-01 100.0% 53.6%
3465277 328.3.1.0 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.79 68.0 5.24e-01 100.0% 83.8%
5004176 256.1.1.0 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.79 68.0 6.45e-01 100.0% 89.1%
3838198 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.78 67.0 5.36e-01 100.0% 60.0%
4992248 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.78 64.0 5.67e-01 97.8% 62.9%
4989805 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.76 64.0 5.65e-01 100.0% 64.3%
3970617 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.76 62.0 5.43e-01 100.0% 60.0%
135569 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.75 62.0 5.46e-01 100.0% 60.8%
5060689 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.75 60.0 5.58e-01 95.7% 71.7%
3965385 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.75 62.0 5.48e-01 95.7% 65.7%
4074459 2003.1.5.55 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.75 63.0 4.19e-01 100.0% 23.1%
4277035 310.3.1.4 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.74 61.0 5.26e-01 100.0% 57.5%
5012030 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.74 59.0 5.31e-01 95.7% 61.4%
4346533 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.74 64.0 4.94e-01 100.0% 51.4%
4010562 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.74 62.0 5.42e-01 100.0% 61.3%
5065935 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 61.0 5.28e-01 95.7% 58.7%
3343069 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.74 62.0 4.66e-01 100.0% 38.3%
5025304 304.24.1.5 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.74 61.0 5.55e-01 95.7% 67.7%
4987072 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.74 61.0 5.27e-01 100.0% 58.2%
1900987 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.74 64.0 4.21e-01 100.0% 24.4%
4218255 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.73 63.0 5.10e-01 100.0% 64.4%
4945580 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.73 59.0 5.13e-01 100.0% 57.0%
5043257 304.24.1.5 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.73 59.0 5.33e-01 93.5% 66.2%
4989708 4262.1.1.1 ↗ a/b three-layered sandwiches › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CobE/CbiG C-terminal domain-like › CbiG_C 0.73 62.0 4.65e-01 100.0% 99.2%
3799570 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 59.0 4.28e-01 97.8% 37.2%
4981701 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.73 58.0 5.32e-01 95.7% 66.2%
4930212 328.7.1.0 ↗ a+b two layers › IF3-like › Smr domain › Smr domain 0.72 61.0 5.43e-01 100.0% 65.7%
3250910 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 59.0 5.20e-01 97.8% 61.4%
3969151 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.72 62.0 5.19e-01 97.8% 66.3%
4971295 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 60.0 4.89e-01 100.0% 48.4%
4991471 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.72 59.0 5.20e-01 100.0% 61.3%
5033793 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.71 58.0 5.12e-01 97.8% 60.8%
4113577 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.71 60.0 4.75e-01 100.0% 54.3%
5044561 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.71 58.0 5.04e-01 100.0% 57.5%
4937497 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 61.0 5.16e-01 100.0% 60.0%
3226102 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.71 57.0 4.50e-01 100.0% 40.7%
3357746 304.12.1.8 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › bHLH-TF_ACT-like_plant 0.71 58.0 5.21e-01 100.0% 68.6%
5022127 2003.1.5.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.71 58.0 4.04e-01 100.0% 27.2%
4987783 304.24.1.5 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.71 57.0 5.38e-01 95.7% 73.3%
5008041 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 4.41e-01 100.0% 35.6%
152843 328.5.1.2 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › NADH-UOR_E 0.71 59.0 5.13e-01 100.0% 63.2%
4997777 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 59.0 4.97e-01 100.0% 54.1%
5064952 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.70 57.0 5.06e-01 100.0% 61.3%
4009838 310.3.1.4 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C 0.70 57.0 4.95e-01 100.0% 57.5%
3454258 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.70 58.0 4.87e-01 97.8% 55.3%
4336441 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.70 59.0 4.76e-01 100.0% 60.0%
3810458 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 57.0 4.70e-01 100.0% 53.7%
3267514 328.3.1.0 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.69 57.0 4.47e-01 100.0% 90.9%
4314924 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.69 56.0 4.47e-01 100.0% 50.9%
4669669 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 58.0 4.50e-01 97.8% 45.5%
3811780 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 58.0 4.44e-01 100.0% 42.6%
3683127 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 55.0 5.29e-01 95.7% 87.3%
5010185 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.68 55.0 4.94e-01 100.0% 64.3%
4943245 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 57.0 4.25e-01 100.0% 60.8%
5012958 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 55.0 4.15e-01 100.0% 59.2%
3565321 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.68 53.0 3.61e-01 100.0% 22.6%
4996402 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 54.0 4.47e-01 97.8% 51.6%
4113237 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.68 56.0 4.55e-01 97.8% 53.7%
4934172 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.67 58.0 5.14e-01 100.0% 70.0%
4062692 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.67 53.0 4.75e-01 100.0% 60.0%
4285074 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.67 54.0 4.30e-01 100.0% 50.9%
4992480 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 54.0 4.57e-01 100.0% 53.3%
5010188 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.67 54.0 4.86e-01 100.0% 64.3%
3218484 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 53.0 4.78e-01 100.0% 62.9%
4976823 305.2.1.0 ↗ a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.67 53.0 4.69e-01 100.0% 58.7%
4997605 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 55.0 4.44e-01 100.0% 48.0%
3451184 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.66 54.0 3.56e-01 100.0% 20.9%
4943420 3501.1.1.2 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 0.66 53.0 4.76e-01 100.0% 62.9%
4993483 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 53.0 4.26e-01 97.8% 48.6%
3642333 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 53.0 3.72e-01 95.7% 26.9%
5029853 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 54.0 4.15e-01 100.0% 63.3%
4993816 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 53.0 3.88e-01 97.8% 33.3%
3693414 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.65 52.0 3.36e-01 100.0% 17.8%
3602264 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.65 53.0 4.55e-01 100.0% 56.5%
3981894 304.8.1.25 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5609 0.64 55.0 4.97e-01 100.0% 73.8%
4997522 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.64 52.0 4.56e-01 100.0% 62.5%
None — 0.64 53.0 3.40e-01 100.0% 18.8%
5000808 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.64 50.0 4.94e-01 100.0% 88.0%
3903698 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.63 51.0 3.37e-01 100.0% 20.0%
4964616 304.162.1.2 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.63 49.0 4.65e-01 100.0% 73.3%
4994004 328.5.1.1 ↗ a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.63 50.0 4.46e-01 97.8% 60.0%
4997781 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.61 48.0 3.96e-01 100.0% 44.8%
4130677 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.61 47.0 4.37e-01 100.0% 68.6%
3737998 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 48.0 4.16e-01 100.0% 58.8%
5015712 2003.1.5.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.60 45.0 2.89e-01 82.6% 14.4%
3609798 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.59 47.0 3.76e-01 100.0% 69.6%
3515414 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.59 46.0 3.81e-01 100.0% 48.6%
3352743 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.59 46.0 3.07e-01 100.0% 19.6%
4972174 328.6.1.2 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.58 48.0 3.12e-01 100.0% 18.4%
4931717 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.58 46.0 3.46e-01 100.0% 46.4%
3365319 3012.1.1.11 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF27677 0.58 45.0 3.94e-01 95.7% 97.5%
5048798 328.6.1.2 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.57 46.0 2.99e-01 95.7% 17.7%
4027054 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.55 44.0 3.65e-01 97.8% 98.0%
None — 0.55 42.0 2.75e-01 80.4% 16.4%
4503816 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.54 46.0 3.72e-01 97.8% 88.4%
3983093 328.6.1.2 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.54 44.0 2.90e-01 100.0% 19.2%
4087209 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.53 40.0 3.62e-01 100.0% 60.0%
3405387 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.04e-01 97.8% 81.8%