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MK613345.1__QBQ72569.1__CRP3_gp20__00020
Bact-VirMK613345.1__QBQ72569.1__CRP3_gp20__00020
Identity
- Accession:
- MK613345 ↗
- Kingdom:
- phage
Quality
57.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 309-499
D2
medium
residues 52-120
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.67 | 56.0 | 4.75e-01 | 94.2% | 87.3% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 46.0 | 4.04e-01 | 72.5% | 64.0% |
| 4rv5A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 48.0 | 3.42e-01 | 85.5% | 36.8% |
| 3ephA02 | 1.10.20.140 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.61 | 43.0 | 4.27e-01 | 85.5% | 70.8% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.59 | 45.0 | 4.20e-01 | 94.2% | 66.7% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 45.0 | 4.43e-01 | 82.6% | 100.0% |
| 4i3fA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 3.10e-01 | 89.9% | 25.8% |
| 4o8sA02 | 1.20.58.1790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › JHP933, helical tail domain | 0.56 | 48.0 | 4.09e-01 | 92.8% | 58.9% |
| 3p8cF01 | 6.10.140.1620 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 49.0 | 4.23e-01 | 98.6% | 72.4% |
| 2fekA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 45.0 | 3.53e-01 | 95.7% | 97.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031630 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.69 | 60.0 | 4.72e-01 | 95.7% | 79.3% |
| 3437512 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.66 | 56.0 | 3.70e-01 | 94.2% | 40.0% |
| 3907738 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 42.0 | 4.24e-01 | 85.5% | 70.0% |
| 3490234 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.58 | 52.0 | 4.26e-01 | 97.1% | 87.5% |
| 4516320 | 3949.1.1.1 ↗ | alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › IPPT | 0.57 | 38.0 | 3.74e-01 | 72.5% | 64.0% |
D3
medium
residues 153-180_201-304
D4
medium
residues 531-588_781-917
D5
medium
residues 918-980