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MK618715.1__QBQ72178.1__CPT_Parlo_029__00029
Bact-VirMK618715.1__QBQ72178.1__CPT_Parlo_029__00029
Identity
- Accession:
- MK618715 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Taxonomy
TaxID: 2557554
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-133
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 56.0 | 4.77e-01 | 84.5% | 67.4% |
| 1fntc01 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.67 | 51.0 | 3.92e-01 | 81.0% | 70.2% |
| 4px7A00 | 1.20.144.10 | Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase | 0.67 | 51.0 | 3.65e-01 | 82.1% | 62.2% |
| 4l9pA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.66 | 45.0 | 2.94e-01 | 70.2% | 26.9% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.64 | 49.0 | 4.13e-01 | 100.0% | 49.3% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 43.0 | 4.44e-01 | 72.6% | 78.2% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 42.0 | 4.74e-01 | 75.0% | 96.8% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.59 | 44.0 | 3.40e-01 | 79.8% | 97.4% |
| 4dmvA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 44.0 | 4.44e-01 | 81.0% | 100.0% |
| 1g7dA00 | 1.20.1150.12 | Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain | 0.55 | 35.0 | 3.26e-01 | 73.8% | 51.9% |
| 2b6cA01 | 1.20.1660.10 | Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) | 0.53 | 36.0 | 3.26e-01 | 70.2% | 63.8% |
| 1i8tA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 2.93e-01 | 76.2% | 98.4% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 37.0 | 3.95e-01 | 76.2% | 96.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4202384 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.83 | 49.0 | 4.72e-01 | 95.2% | 52.6% |
| 3179523 | 109.3.1.150 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Sec39 | 0.78 | 55.0 | 3.52e-01 | 73.8% | 37.7% |
| 3199780 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.77 | 55.0 | 4.01e-01 | 100.0% | 30.2% |
| 3694591 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.69 | 52.0 | 4.59e-01 | 92.9% | 55.0% |
| 3416428 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.69 | 52.0 | 3.98e-01 | 100.0% | 37.2% |
| 3232043 | 101.1.2.473 ↗ | alpha arrays › HTH › HTH › winged helix domain › UFL1_C | 0.68 | 48.0 | 4.56e-01 | 78.6% | 62.0% |
| 4420072 | 601.7.1.35 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › UFL1_C | 0.68 | 51.0 | 4.59e-01 | 83.3% | 58.3% |
| 3182667 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 48.0 | 3.46e-01 | 73.8% | 35.7% |
| 3415677 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.66 | 58.0 | 3.51e-01 | 98.8% | 14.3% |
| 4392772 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.63 | 58.0 | 5.23e-01 | 98.8% | 97.3% |
| 4216957 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.63 | 47.0 | 3.65e-01 | 78.6% | 75.6% |
| 4019827 | 109.54.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › PF28770 | 0.61 | 49.0 | 3.30e-01 | 88.1% | 45.9% |
| 3541263 | 604.1.1.227 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27002 | 0.60 | 54.0 | 4.46e-01 | 97.6% | 97.2% |
| 3365651 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.59 | 47.0 | 3.01e-01 | 84.5% | 22.8% |
| 4102807 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.58 | 53.0 | 4.92e-01 | 98.8% | 86.7% |
| 3221654 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.58 | 49.0 | 3.85e-01 | 90.5% | 100.0% |
| 3616792 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.57 | 46.0 | 3.56e-01 | 89.3% | 74.0% |
| 3623558 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 49.0 | 3.15e-01 | 100.0% | 20.5% |
| 4412437 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 44.0 | 4.32e-01 | 85.7% | 80.0% |
| 4200387 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.53 | 48.0 | 4.74e-01 | 100.0% | 100.0% |
| 4030562 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.52 | 38.0 | 3.98e-01 | 90.5% | 88.0% |