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MK620899.1__QBZ72743.1__SEA_GODONK_133__00124
Bact-VirMK620899.1__QBZ72743.1__SEA_GODONK_133__00124
Identity
- Accession:
- MK620899 ↗
- Kingdom:
- phage
Quality
93.7
mean pLDDT
Taxonomy
TaxID: 2562192
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-51
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 51.0 | 3.95e-01 | 75.0% | 53.4% |
| 3qqaA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 49.0 | 4.57e-01 | 87.5% | 89.8% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.59 | 43.0 | 3.84e-01 | 83.3% | 60.0% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 45.0 | 4.28e-01 | 91.7% | 94.8% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.51 | 41.0 | 2.49e-01 | 100.0% | 77.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1227109 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.63 | 53.0 | 3.36e-01 | 95.8% | 21.5% |
| 4422529 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.61 | 52.0 | 3.41e-01 | 93.8% | 35.9% |
| 5028090 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.60 | 44.0 | 3.15e-01 | 77.1% | 25.5% |
| 4569038 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.60 | 49.0 | 4.66e-01 | 87.5% | 96.4% |
| 5013811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 39.0 | 3.79e-01 | 72.9% | 58.2% |
| 3215476 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 41.0 | 3.36e-01 | 93.8% | 40.0% |
| 3574709 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 42.0 | 3.96e-01 | 87.5% | 96.7% |
| 4016522 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.50 | 42.0 | 3.33e-01 | 93.8% | 65.0% |
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 41.0 | 3.96e-01 | 91.7% | 89.1% |