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MK629528.1__QBZ71522.1__X__00018

Bact-Vir

MK629528.1__QBZ71522.1__X__00018

Identity

Accession:
MK629528 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-78
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 53.0 6.01e-01 98.6% 100.0%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.76 55.0 6.12e-01 98.6% 100.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 49.0 5.40e-01 93.1% 87.5%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 49.0 4.97e-01 98.6% 69.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 45.0 5.14e-01 95.8% 92.3%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 4.97e-01 100.0% 74.0%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.68 55.0 4.00e-01 100.0% 32.2%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 44.0 5.01e-01 93.1% 90.7%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 43.0 5.07e-01 87.5% 100.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 41.0 4.95e-01 90.3% 97.8%
2y9fA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.66 58.0 4.65e-01 100.0% 97.3%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.19e-01 100.0% 92.3%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.64 38.0 4.22e-01 98.6% 75.4%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 52.0 5.17e-01 98.6% 86.7%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 41.0 3.81e-01 75.0% 51.1%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 51.0 4.93e-01 100.0% 79.0%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 5.07e-01 95.8% 89.2%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 4.91e-01 91.7% 98.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 46.0 4.50e-01 94.4% 74.7%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.95e-01 93.1% 100.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 44.0 4.73e-01 91.7% 96.6%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 44.0 4.76e-01 91.7% 100.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 44.0 4.47e-01 94.4% 84.3%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 4.66e-01 90.3% 98.3%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.76e-01 100.0% 86.7%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 4.44e-01 75.0% 96.8%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 43.0 4.53e-01 93.1% 90.6%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 3.88e-01 94.4% 58.2%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 52.0 4.77e-01 100.0% 84.9%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 4.72e-01 93.1% 98.4%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 43.0 4.55e-01 91.7% 96.7%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 4.75e-01 83.3% 93.8%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.69e-01 90.3% 100.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 43.0 4.51e-01 93.1% 96.8%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 4.44e-01 90.3% 100.0%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 4.55e-01 81.9% 98.4%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 44.0 4.45e-01 93.1% 86.3%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.52e-01 86.1% 78.1%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 39.0 4.30e-01 87.5% 100.0%
4opcA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 2.48e-01 80.6% 67.5%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 45.0 3.03e-01 94.4% 27.7%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 41.0 4.09e-01 94.4% 80.5%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.86e-01 87.5% 67.4%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 46.0 3.53e-01 100.0% 47.4%
2rghA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 2.69e-01 79.2% 79.1%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 2.97e-01 79.2% 90.5%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 4.13e-01 81.9% 98.5%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 2.97e-01 77.8% 90.4%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 38.0 4.10e-01 88.9% 100.0%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 4.15e-01 80.6% 100.0%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.50e-01 100.0% 83.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.77e-01 94.4% 80.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3671396 4.1.1.316 beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.76 57.0 5.74e-01 100.0% 79.5%
3577505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 4.89e-01 100.0% 61.2%
3665882 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 54.0 4.41e-01 100.0% 41.5%
3627914 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 55.0 4.90e-01 100.0% 57.0%
3482225 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.73 54.0 4.44e-01 100.0% 43.8%
3230520 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 51.0 4.76e-01 100.0% 60.0%
4055256 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 50.0 4.68e-01 100.0% 58.9%
3570700 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 52.0 4.47e-01 100.0% 48.7%
3340900 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.13e-01 100.0% 80.0%
3629830 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 51.0 4.81e-01 100.0% 63.5%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.71 53.0 4.48e-01 100.0% 48.3%
3333322 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 49.0 4.02e-01 100.0% 39.3%
3826746 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 50.0 4.87e-01 100.0% 67.5%
3828348 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.09e-01 100.0% 81.5%
3452043 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 3.95e-01 100.0% 39.3%
3935130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 47.0 5.20e-01 94.4% 92.7%
3449268 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 4.65e-01 100.0% 63.5%
4269256 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.68 48.0 5.25e-01 100.0% 90.0%
3214474 4.1.1.390 beta barrels › SH3 › SH3 › SH3 › PF29855 0.67 53.0 4.78e-01 100.0% 62.0%
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 51.0 4.05e-01 100.0% 40.7%
3769507 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.65 47.0 4.83e-01 100.0% 80.0%
2816341 375.1.1.189 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EcdD_BsdD_detox 0.64 37.0 3.94e-01 79.2% 63.5%
3928262 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 5.29e-01 94.4% 100.0%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 48.0 5.15e-01 95.8% 98.3%
3211839 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 5.15e-01 98.6% 90.0%
3222195 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 49.0 5.10e-01 98.6% 95.4%
3342793 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 54.0 4.01e-01 100.0% 37.4%
3503771 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 48.0 5.03e-01 98.6% 93.8%
3747392 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.62 46.0 4.80e-01 95.8% 90.8%
3902975 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 47.0 4.97e-01 93.1% 100.0%
538 4.1.1.120 beta barrels › SH3 › SH3 › SH3 › SH3_16 0.61 51.0 5.06e-01 95.8% 89.2%
4003123 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 46.0 4.85e-01 94.4% 92.3%
4082863 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 45.0 4.62e-01 93.1% 84.3%
3498357 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 46.0 4.65e-01 94.4% 84.3%
3774692 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.60 49.0 4.80e-01 100.0% 83.7%
4021478 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.58e-01 100.0% 74.1%
3620934 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 45.0 4.43e-01 94.4% 75.0%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 48.0 4.50e-01 97.2% 72.2%
4171510 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 45.0 4.39e-01 93.1% 73.8%
3775595 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 46.0 4.85e-01 98.6% 95.4%
4100221 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 47.0 4.92e-01 83.3% 92.3%
4579534 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 46.0 4.82e-01 81.9% 95.4%
3317544 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 46.0 4.81e-01 81.9% 93.8%
4358761 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 46.0 4.81e-01 81.9% 93.8%
4059146 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.59 44.0 4.67e-01 80.6% 95.4%
3920103 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 44.0 4.15e-01 93.1% 65.6%
3624017 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 45.0 4.71e-01 94.4% 93.8%
3842441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 42.0 4.50e-01 90.3% 91.7%
3416133 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 44.0 4.38e-01 93.1% 78.7%
3535424 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 45.0 4.61e-01 94.4% 87.1%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 4.31e-01 91.7% 77.3%
3930461 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 44.0 4.35e-01 93.1% 78.7%
3619598 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 43.0 4.09e-01 91.7% 67.1%
3188199 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 4.18e-01 94.4% 72.5%
3231704 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 4.45e-01 93.1% 89.2%
3625911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 43.0 4.53e-01 93.1% 90.8%
3170397 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 43.0 4.22e-01 94.4% 72.5%
3383283 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.57 44.0 4.66e-01 81.9% 96.9%
4252940 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.57 45.0 4.77e-01 83.3% 92.3%
3486189 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 43.0 4.62e-01 94.4% 100.0%
3898672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 40.0 4.18e-01 86.1% 81.5%
3846212 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 43.0 4.19e-01 91.7% 73.8%
3234947 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 42.0 4.41e-01 94.4% 90.8%
4119533 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.57 45.0 4.87e-01 83.3% 100.0%
3240192 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 42.0 4.23e-01 91.7% 78.7%
3581719 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 46.0 3.96e-01 95.8% 56.5%
3633434 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 41.0 4.23e-01 91.7% 81.4%
3890893 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 40.0 4.44e-01 87.5% 100.0%
3914462 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 45.0 4.21e-01 95.8% 71.1%
3768832 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.56 38.0 4.20e-01 81.9% 94.5%
3749194 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 41.0 4.34e-01 79.2% 90.6%
3925642 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 44.0 3.99e-01 94.4% 63.0%
5017134 208.1.1.1 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.56 43.0 3.18e-01 83.3% 35.9%
4250239 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.55 43.0 4.51e-01 83.3% 95.4%
3507664 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 40.0 4.22e-01 91.7% 95.0%
2717779 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 40.0 3.87e-01 94.4% 70.7%
4168836 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.53 42.0 4.28e-01 84.7% 90.0%
4012096 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 41.0 3.63e-01 93.1% 55.5%
3398298 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 40.0 3.89e-01 81.9% 85.0%
4263806 4099.1.1.3 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.53 39.0 4.17e-01 97.2% 94.9%
4950397 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 31.0 3.47e-01 84.7% 76.4%
4165004 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.53 45.0 4.48e-01 95.8% 94.7%
3283507 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.53 42.0 3.97e-01 88.9% 94.4%
3203654 601.16.1.12 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1 0.53 41.0 3.02e-01 94.4% 31.0%
4170380 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 40.0 3.60e-01 81.9% 72.0%