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MK637516.2__QBQ72045.1__Milano_022__00024
Bact-VirMK637516.2__QBQ72045.1__Milano_022__00024
Identity
- Accession:
- MK637516 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Taxonomy
TaxID: 2557550
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-86
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.74 | 69.0 | 6.25e-01 | 100.0% | 88.2% |
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.63 | 50.0 | 4.85e-01 | 100.0% | 77.1% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.61 | 54.0 | 5.05e-01 | 100.0% | 82.2% |
| 3htmA02 | 6.10.250.3030 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 29.0 | 3.96e-01 | 96.5% | 97.5% |
| 2px0A01 | 1.20.120.1380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain | 0.58 | 38.0 | 4.09e-01 | 80.0% | 79.5% |
| 4d0yA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.55 | 48.0 | 3.80e-01 | 98.8% | 64.1% |
| 4iiqC02 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.54 | 38.0 | 3.06e-01 | 74.1% | 66.3% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 37.0 | 3.54e-01 | 80.0% | 60.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 119441 | 3103.1.1.1 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_5 | 0.74 | 68.0 | 6.06e-01 | 100.0% | 82.4% |
| 3946464 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.68 | 62.0 | 6.02e-01 | 100.0% | 97.9% |
| 4954554 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.68 | 61.0 | 5.68e-01 | 100.0% | 81.0% |
| 4976626 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.68 | 38.0 | 2.80e-01 | 100.0% | 20.9% |
| 3233146 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.60 | 35.0 | 3.32e-01 | 94.1% | 50.0% |
| 4559880 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 49.0 | 4.75e-01 | 100.0% | 85.3% |
| 4371213 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 48.0 | 4.62e-01 | 100.0% | 84.0% |
| 4502274 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.53 | 46.0 | 4.50e-01 | 97.6% | 87.4% |
| 4020836 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.53 | 42.0 | 3.39e-01 | 89.4% | 96.1% |
| 4340919 | 306.7.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain | 0.53 | 44.0 | 4.32e-01 | 98.8% | 86.3% |
| 3204927 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.52 | 41.0 | 3.30e-01 | 89.4% | 91.1% |
D2
high
residues 94-193
Domain cluster:
rep: OM046624.1__UNA05762.1__vBYenM4218_048__00048__D36-125
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.60 | 49.0 | 4.83e-01 | 90.0% | 86.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945607 | 3547.1.1.2 ↗ | a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › Phage_TAC_7 | 0.78 | 60.0 | 6.45e-01 | 87.0% | 95.3% |
| 333304 | 6050.1.1.1 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 | 0.60 | 48.0 | 4.77e-01 | 90.0% | 82.7% |
| 4975198 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 43.0 | 3.98e-01 | 90.0% | 66.2% |
| 3920858 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.52 | 37.0 | 3.69e-01 | 92.0% | 70.5% |
| 3560070 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.51 | 36.0 | 3.59e-01 | 92.0% | 69.5% |
| 5021230 | 101.1.1.544 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 | 0.51 | 39.0 | 3.78e-01 | 88.0% | 74.5% |