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MK660713.1__QBZ73222.1__SEA_THERESITA_33__00033

Bact-Vir

MK660713.1__QBZ73222.1__SEA_THERESITA_33__00033

Identity

Accession:
MK660713 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-91
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10263.16 best SprT-like 39.8 5.00e-10 97.8% 75.7%
D2 high residues 186-249
PDB
D3 medium residues 105-166
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d9oA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 38.0 3.30e-01 77.4% 79.0%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.53 40.0 4.04e-01 85.5% 93.7%
2cpjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 36.0 3.25e-01 79.0% 76.8%
2mgzA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 38.0 3.40e-01 85.5% 85.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3819163 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 48.0 4.10e-01 91.9% 90.9%
3734198 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 42.0 3.57e-01 85.5% 80.0%
5052830 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.05e-01 80.6% 60.2%