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MK672798.1__QBZ71650.1__X__00023

Bact-Vir

MK672798.1__QBZ71650.1__X__00023

Identity

Accession:
MK672798 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 370-451
PDB
D2 medium residues 1-85
PDB
D3 medium residues 129-188
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gqaB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.65 55.0 3.69e-01 95.0% 69.3%
4ifdF00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.65 49.0 3.36e-01 81.7% 50.7%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.64 41.0 3.56e-01 81.7% 41.1%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 55.0 4.15e-01 98.3% 71.4%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.64 55.0 3.93e-01 98.3% 47.8%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 50.0 3.39e-01 88.3% 83.8%
2p2sA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 53.0 3.72e-01 96.7% 73.5%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 53.0 3.64e-01 95.0% 65.0%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 4.07e-01 75.0% 69.7%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 43.0 3.48e-01 75.0% 44.2%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.61 53.0 4.02e-01 98.3% 47.0%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.61 44.0 3.35e-01 83.3% 33.6%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.61 51.0 4.08e-01 95.0% 65.0%
5nn3A05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 46.0 3.61e-01 83.3% 81.1%
2v73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 47.0 3.34e-01 83.3% 54.6%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 50.0 3.51e-01 95.0% 64.1%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.59 53.0 4.08e-01 100.0% 60.9%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.59 50.0 3.57e-01 95.0% 34.8%
2glxA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 49.0 3.40e-01 95.0% 64.0%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.58 40.0 2.92e-01 81.7% 25.4%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.58 45.0 4.12e-01 90.0% 64.7%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 48.0 3.66e-01 95.0% 83.8%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.57 49.0 3.61e-01 100.0% 64.7%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.45e-01 86.7% 75.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 3.88e-01 81.7% 61.7%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.77e-01 100.0% 43.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.56 47.0 3.62e-01 95.0% 82.9%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.56 46.0 3.39e-01 95.0% 48.8%
4fffA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 47.0 3.54e-01 95.0% 56.9%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.55 43.0 3.95e-01 86.7% 97.6%
1a8dA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 3.20e-01 100.0% 54.5%
5u78C00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.70e-01 93.3% 71.6%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 40.0 3.91e-01 83.3% 77.5%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 2.94e-01 100.0% 42.6%
1oypA01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.54 40.0 2.80e-01 80.0% 70.1%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.54 39.0 3.42e-01 83.3% 49.5%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 42.0 3.73e-01 88.3% 70.3%
1td2A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 38.0 2.52e-01 78.3% 40.8%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 44.0 2.81e-01 100.0% 43.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 45.0 3.56e-01 93.3% 52.5%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 45.0 3.12e-01 100.0% 87.2%
3m4pA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 43.0 3.60e-01 93.3% 68.8%
3bywC00 2.60.120.610 Mainly Beta › Sandwich › Jelly Rolls › arabinofuranosyltransferase like domain 0.53 45.0 3.36e-01 98.3% 51.9%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 44.0 3.27e-01 100.0% 92.8%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.50e-01 90.0% 65.5%
5jeaD00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.52 42.0 2.92e-01 91.7% 50.0%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 3.22e-01 70.0% 85.2%
4jgjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.59e-01 95.0% 53.9%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 37.0 3.30e-01 78.3% 73.4%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.51 37.0 3.48e-01 80.0% 62.5%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.51 43.0 3.60e-01 96.7% 57.5%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 37.0 2.43e-01 86.7% 81.2%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 42.0 3.77e-01 96.7% 70.8%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.46e-01 100.0% 59.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5025461 3347.1.1.0 beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 0.71 60.0 5.55e-01 98.3% 74.7%
3242239 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 51.0 3.06e-01 80.0% 11.8%
3587184 241.12.1.4 a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › HI_0552 0.69 54.0 3.70e-01 86.7% 70.7%
4466450 63.1.1.0 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain 0.68 61.0 4.63e-01 100.0% 52.1%
3311716 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.68 54.0 4.19e-01 86.7% 56.2%
3666734 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.67 53.0 4.14e-01 86.7% 66.9%
None 0.67 50.0 3.06e-01 81.7% 95.3%
1879626 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.66 48.0 3.26e-01 78.3% 22.1%
3690503 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.65 57.0 4.65e-01 96.7% 79.8%
3717506 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 54.0 3.31e-01 93.3% 54.3%
3491452 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.62 50.0 3.04e-01 86.7% 37.7%
4237612 3006.1.1.6 a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.62 46.0 4.12e-01 80.0% 58.8%
3917877 5.1.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin 0.61 46.0 3.25e-01 81.7% 87.5%
3393795 77.1.1.3 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 0.61 53.0 3.50e-01 100.0% 26.9%
3922599 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 4.15e-01 80.0% 60.0%
3396245 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.60 51.0 3.69e-01 100.0% 34.7%
3885876 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 53.0 3.44e-01 100.0% 57.5%
3709799 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.16e-01 100.0% 36.7%
3785046 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.59 45.0 3.75e-01 83.3% 70.9%
3629564 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 45.0 3.45e-01 83.3% 73.1%
3427945 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.59 48.0 4.14e-01 93.3% 61.0%
3988707 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 36.0 3.81e-01 73.3% 67.3%
None 0.59 44.0 2.73e-01 80.0% 26.6%
3410497 5.1.4.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.59 50.0 3.02e-01 95.0% 34.3%
3516145 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 44.0 4.12e-01 85.0% 70.0%
3418904 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.58 49.0 4.20e-01 96.7% 61.0%
4029923 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 50.0 3.35e-01 93.3% 47.6%
1806527 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 47.0 3.58e-01 95.0% 89.5%
1005444 295.2.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › Outer surface protein E › Outer surface protein E › OspE 0.58 51.0 3.83e-01 100.0% 54.3%
4231837 7520.1.1.1 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA 0.58 42.0 3.19e-01 76.7% 42.8%
4480068 298.3.1.0 a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like 0.58 49.0 3.73e-01 95.0% 81.4%
5018712 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.58 43.0 3.78e-01 90.0% 53.3%
3740622 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.57 48.0 3.04e-01 96.7% 52.0%
3425128 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.57 41.0 2.96e-01 76.7% 31.7%
2834433 7515.1.1.5 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C 0.56 50.0 2.94e-01 100.0% 76.8%
3700773 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.56 47.0 3.49e-01 100.0% 55.6%
4460991 12.6.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.56 38.0 3.55e-01 73.3% 73.8%
3481273 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 41.0 3.57e-01 85.0% 53.3%
5077103 5.1.11.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › PQQ_2 0.55 45.0 2.67e-01 90.0% 27.2%
2145749 330.19.1.1 a+b two layers › dsRBD-like › Anti-CRISPR protein Acr30-35/AcrF1 › Anti-CRISPR protein Acr30-35/AcrF1 › Acr30-35_AcrF1 0.55 45.0 4.19e-01 95.0% 93.8%
3908192 3338.2.1.0 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.54 45.0 3.81e-01 95.0% 55.0%
3784979 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.19e-01 85.0% 67.6%
3738403 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.54 44.0 2.62e-01 91.7% 28.0%
3744629 220.1.1.34 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.53 43.0 3.40e-01 88.3% 80.0%
4504274 7515.1.1.2 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.53 41.0 2.52e-01 86.7% 81.5%
4251413 4099.1.1.26 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.53 44.0 3.65e-01 96.7% 53.0%
3390821 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 41.0 3.83e-01 91.7% 70.0%
3270476 213.1.1.25 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.52 41.0 2.90e-01 91.7% 50.5%
4289517 2003.6.1.5 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.52 45.0 2.91e-01 96.7% 67.7%
4479826 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.69e-01 91.7% 36.7%
None 0.52 37.0 2.46e-01 78.3% 53.0%
3744190 220.1.1.43 beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.51 41.0 3.33e-01 88.3% 65.8%
3250619 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.31e-01 85.0% 74.5%
2083172 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.73e-01 100.0% 54.3%
3393983 220.1.1.86 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.51 42.0 3.45e-01 90.0% 60.9%
2909907 7515.1.1.5 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C 0.51 42.0 2.63e-01 100.0% 24.5%
3175837 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 3.19e-01 95.0% 53.3%
3298632 220.1.1.44 beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.51 41.0 3.44e-01 86.7% 65.0%
4018795 220.1.1.43 beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.50 41.0 3.25e-01 90.0% 62.9%
3301602 5.1.2.41 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40_RFWD3 0.50 42.0 3.08e-01 98.3% 69.4%
3537565 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 40.0 3.70e-01 90.0% 96.2%
3497653 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.30e-01 91.7% 67.2%
D4 medium residues 301-343
PDB