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MK672802.1__QCW19658.1__X__00004
Bact-VirMK672802.1__QCW19658.1__X__00004
Identity
- Accession:
- MK672802 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-54
Domain cluster:
rep: MT330372.1__QJI52229.1__X__00010__D23-76
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07278.19 best | DUF1441 | 34.8 | 2.20e-08 | 100.0% | 32.2% |
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.82 | 71.0 | 6.42e-01 | 100.0% | 73.1% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.78 | 68.0 | 5.10e-01 | 100.0% | 39.7% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.77 | 67.0 | 5.33e-01 | 100.0% | 48.5% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.75 | 64.0 | 5.41e-01 | 100.0% | 57.6% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.75 | 64.0 | 5.66e-01 | 100.0% | 68.1% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.72 | 59.0 | 5.40e-01 | 100.0% | 84.3% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.72 | 61.0 | 5.40e-01 | 100.0% | 68.5% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.70 | 59.0 | 5.65e-01 | 100.0% | 89.7% |
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.68 | 55.0 | 4.48e-01 | 97.9% | 46.4% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 3.96e-01 | 93.8% | 35.5% |
| 2jmlA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.66 | 53.0 | 4.72e-01 | 100.0% | 63.0% |
| 6g1dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 4.59e-01 | 93.8% | 73.2% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.49e-01 | 93.8% | 68.2% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 4.47e-01 | 93.8% | 67.4% |
| 3futA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.63 | 52.0 | 4.77e-01 | 100.0% | 69.2% |
| 3hhgE01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.31e-01 | 93.8% | 68.2% |
| 6oinA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 53.0 | 4.76e-01 | 95.8% | 71.6% |
| 1wxqA02 | 1.10.8.470 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 53.0 | 4.38e-01 | 100.0% | 61.1% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.60 | 44.0 | 4.22e-01 | 79.2% | 69.1% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 51.0 | 4.31e-01 | 100.0% | 66.3% |
| 1jeqA05 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.57 | 42.0 | 4.15e-01 | 79.2% | 72.5% |
| 2v6eA04 | 1.10.10.2040 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 40.0 | 3.38e-01 | 79.2% | 41.9% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.56 | 47.0 | 4.24e-01 | 100.0% | 68.7% |
| 1t0fA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 48.0 | 3.41e-01 | 100.0% | 88.9% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.69e-01 | 87.5% | 57.5% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.34e-01 | 87.5% | 41.3% |
| 4f03A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 38.0 | 3.09e-01 | 79.2% | 65.7% |
| 3e2dA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.50 | 40.0 | 2.49e-01 | 100.0% | 81.6% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.84 | 75.0 | 7.27e-01 | 100.0% | 90.6% |
| 4266122 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.83 | 72.0 | 5.80e-01 | 100.0% | 51.6% |
| 3946974 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.82 | 72.0 | 5.56e-01 | 100.0% | 46.7% |
| 4051681 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.81 | 70.0 | 5.09e-01 | 100.0% | 36.3% |
| 4090636 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.81 | 70.0 | 6.24e-01 | 100.0% | 70.0% |
| 3974460 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.80 | 69.0 | 5.03e-01 | 100.0% | 36.2% |
| 3278826 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.80 | 69.0 | 5.12e-01 | 97.9% | 39.2% |
| 3972191 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.80 | 69.0 | 4.94e-01 | 97.9% | 33.6% |
| 4520820 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.80 | 69.0 | 5.97e-01 | 97.9% | 62.7% |
| 4420911 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.80 | 70.0 | 5.05e-01 | 100.0% | 35.6% |
| 4061721 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.80 | 70.0 | 5.10e-01 | 100.0% | 37.7% |
| 3288205 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.80 | 70.0 | 5.90e-01 | 100.0% | 60.0% |
| 3962178 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.80 | 69.0 | 5.18e-01 | 100.0% | 55.8% |
| 1827815 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.79 | 69.0 | 6.19e-01 | 100.0% | 72.1% |
| 3290892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.79 | 69.0 | 5.37e-01 | 100.0% | 46.7% |
| 4488952 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.79 | 67.0 | 5.19e-01 | 97.9% | 43.6% |
| 3966930 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.79 | 69.0 | 5.28e-01 | 100.0% | 43.6% |
| 2527708 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.78 | 66.0 | 4.73e-01 | 97.9% | 33.6% |
| 4929856 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.77 | 66.0 | 5.47e-01 | 100.0% | 53.3% |
| 3975516 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.77 | 66.0 | 5.14e-01 | 97.9% | 44.8% |
| 4096952 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 67.0 | 5.07e-01 | 100.0% | 42.6% |
| 4518241 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 67.0 | 5.80e-01 | 100.0% | 64.0% |
| 4034325 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 66.0 | 4.93e-01 | 100.0% | 39.2% |
| 5070666 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.77 | 66.0 | 6.41e-01 | 100.0% | 87.3% |
| 4672676 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 66.0 | 4.77e-01 | 100.0% | 35.0% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.76 | 65.0 | 5.60e-01 | 100.0% | 60.0% |
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.76 | 66.0 | 5.08e-01 | 100.0% | 47.3% |
| 3953197 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.76 | 64.0 | 5.21e-01 | 100.0% | 49.5% |
| 3291218 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.76 | 64.0 | 4.79e-01 | 100.0% | 37.7% |
| 1068666 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.76 | 66.0 | 5.24e-01 | 100.0% | 48.0% |
| 3282255 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.76 | 65.0 | 5.07e-01 | 100.0% | 45.4% |
| 3288603 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.76 | 64.0 | 5.59e-01 | 97.9% | 64.0% |
| 3949463 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.76 | 66.0 | 4.99e-01 | 100.0% | 41.7% |
| 3945289 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.76 | 65.0 | 4.84e-01 | 100.0% | 41.6% |
| 4375315 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 64.0 | 6.37e-01 | 100.0% | 94.0% |
| 3976015 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.75 | 64.0 | 5.51e-01 | 100.0% | 60.0% |
| 5082561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 65.0 | 6.44e-01 | 100.0% | 96.0% |
| 4181286 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 61.0 | 6.32e-01 | 93.8% | 97.8% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.75 | 64.0 | 6.20e-01 | 100.0% | 92.7% |
| 3960483 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 63.0 | 6.27e-01 | 100.0% | 94.0% |
| 171609 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.75 | 64.0 | 4.69e-01 | 100.0% | 36.8% |
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.74 | 64.0 | 6.40e-01 | 100.0% | 100.0% |
| 4548007 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.74 | 63.0 | 5.32e-01 | 100.0% | 56.5% |
| 5064906 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.74 | 63.0 | 6.12e-01 | 100.0% | 92.7% |
| 4027085 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.73 | 64.0 | 5.87e-01 | 100.0% | 81.0% |
| 4553393 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 59.0 | 5.67e-01 | 97.9% | 80.0% |
| 3958314 | 101.1.9.66 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH | 0.73 | 62.0 | 5.95e-01 | 100.0% | 85.5% |
| 3366705 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 60.0 | 5.51e-01 | 100.0% | 70.8% |
| None | — | 0.72 | 62.0 | 5.52e-01 | 100.0% | 70.0% | |
| 5027627 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 60.0 | 5.84e-01 | 100.0% | 89.1% |
| 282935 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.71 | 62.0 | 4.11e-01 | 100.0% | 24.5% |
| 3946914 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 60.0 | 4.48e-01 | 100.0% | 37.7% |
| 3605934 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.71 | 60.0 | 4.64e-01 | 100.0% | 54.8% |
| 4401871 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.71 | 60.0 | 5.76e-01 | 100.0% | 83.6% |
| 4564454 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 59.0 | 4.67e-01 | 100.0% | 46.7% |
| 4682727 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.69 | 60.0 | 5.78e-01 | 100.0% | 90.9% |
| 3476358 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 60.0 | 5.62e-01 | 100.0% | 86.7% |
| 4962936 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.66 | 55.0 | 4.05e-01 | 93.8% | 40.8% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 56.0 | 5.03e-01 | 100.0% | 78.6% |
| 4339706 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.64 | 53.0 | 4.39e-01 | 93.8% | 65.6% |
| 2831957 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.64 | 53.0 | 4.35e-01 | 93.8% | 66.3% |
| 3166394 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.62 | 51.0 | 4.12e-01 | 93.8% | 59.0% |
| 3384684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 49.0 | 4.22e-01 | 93.8% | 72.9% |
| 4567937 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.61 | 44.0 | 4.36e-01 | 77.1% | 76.0% |
| 2760149 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.61 | 53.0 | 4.27e-01 | 95.8% | 51.1% |
| 3537579 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 44.0 | 3.95e-01 | 100.0% | 60.0% |
| 4024444 | 5068.1.1.1 ↗ | alpha bundles › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Cytochrom_B_C | 0.54 | 43.0 | 3.30e-01 | 91.7% | 71.2% |
| 3698130 | 216.1.1.14 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med1 | 0.54 | 43.0 | 3.55e-01 | 100.0% | 95.2% |
| 4970860 | 377.3.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › SAP30 zinc finger › SAP30 zinc finger | 0.50 | 41.0 | 3.85e-01 | 100.0% | 76.9% |
D2
medium
residues 98-155
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 73.0 | 7.36e-01 | 89.7% | 91.2% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 67.0 | 5.02e-01 | 100.0% | 40.1% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 64.0 | 6.32e-01 | 98.3% | 98.4% |
| 6ircA01 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.74 | 63.0 | 4.40e-01 | 100.0% | 29.1% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.74 | 60.0 | 4.48e-01 | 89.7% | 75.0% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.74 | 64.0 | 3.99e-01 | 100.0% | 28.5% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 50.0 | 5.55e-01 | 75.9% | 100.0% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 53.0 | 5.43e-01 | 84.5% | 82.1% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.72 | 63.0 | 4.76e-01 | 100.0% | 79.9% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.72 | 51.0 | 3.76e-01 | 75.9% | 29.3% |
| 6qelA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.72 | 57.0 | 4.28e-01 | 89.7% | 34.4% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 55.0 | 5.79e-01 | 91.4% | 94.2% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.70 | 61.0 | 5.52e-01 | 96.6% | 71.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.69 | 52.0 | 4.48e-01 | 81.0% | 51.6% |
| 2iiuA00 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.69 | 59.0 | 4.10e-01 | 100.0% | 27.9% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.67 | 57.0 | 5.34e-01 | 100.0% | 82.4% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.67 | 47.0 | 5.05e-01 | 75.9% | 84.3% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.66 | 46.0 | 4.53e-01 | 96.6% | 67.2% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 57.0 | 4.55e-01 | 100.0% | 50.4% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.65 | 55.0 | 4.33e-01 | 98.3% | 46.1% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 54.0 | 5.09e-01 | 98.3% | 77.8% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.64 | 49.0 | 4.22e-01 | 81.0% | 81.6% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.64 | 54.0 | 3.92e-01 | 91.4% | 58.9% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 55.0 | 4.62e-01 | 98.3% | 57.4% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 47.0 | 5.09e-01 | 81.0% | 93.8% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 51.0 | 4.58e-01 | 87.9% | 65.4% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.63 | 54.0 | 4.26e-01 | 100.0% | 77.7% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.63 | 44.0 | 4.50e-01 | 74.1% | 77.2% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.63 | 51.0 | 3.67e-01 | 91.4% | 31.4% |
| 5eghB01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.63 | 54.0 | 3.47e-01 | 98.3% | 72.3% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.62 | 51.0 | 3.99e-01 | 98.3% | 56.6% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.62 | 51.0 | 3.90e-01 | 96.6% | 64.2% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.61 | 53.0 | 4.83e-01 | 98.3% | 75.3% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.60 | 49.0 | 3.84e-01 | 98.3% | 55.6% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.59 | 49.0 | 4.72e-01 | 94.8% | 92.6% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 50.0 | 3.20e-01 | 98.3% | 41.7% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 4.87e-01 | 89.7% | 89.7% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.58 | 49.0 | 4.36e-01 | 98.3% | 80.2% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 51.0 | 4.77e-01 | 100.0% | 90.4% |
| 2btoA03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 44.0 | 4.53e-01 | 87.9% | 92.6% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 48.0 | 4.69e-01 | 100.0% | 87.5% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.56 | 47.0 | 4.68e-01 | 94.8% | 91.9% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.55 | 44.0 | 4.03e-01 | 87.9% | 86.1% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 43.0 | 4.29e-01 | 89.7% | 87.1% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 45.0 | 4.34e-01 | 96.6% | 81.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3585439 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.81 | 72.0 | 4.67e-01 | 100.0% | 23.6% |
| 3389928 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.80 | 70.0 | 4.95e-01 | 100.0% | 32.8% |
| 4417777 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.79 | 66.0 | 5.02e-01 | 93.1% | 40.8% |
| 3643372 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.78 | 65.0 | 6.35e-01 | 94.8% | 83.1% |
| 3680918 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.77 | 67.0 | 6.53e-01 | 100.0% | 89.2% |
| 223985 | 3600.1.1.1 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD | 0.76 | 67.0 | 5.03e-01 | 100.0% | 40.4% |
| 3588971 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.75 | 57.0 | 5.22e-01 | 81.0% | 64.0% |
| 3802520 | 101.1.1.476 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › POX | 0.75 | 60.0 | 5.07e-01 | 100.0% | 52.0% |
| 4039262 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.75 | 63.0 | 4.00e-01 | 94.8% | 19.0% |
| None | — | 0.75 | 67.0 | 4.26e-01 | 100.0% | 21.8% | |
| None | — | 0.74 | 63.0 | 3.76e-01 | 98.3% | 32.1% | |
| 4327215 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.74 | 66.0 | 5.26e-01 | 100.0% | 52.2% |
| 2144829 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.74 | 64.0 | 3.98e-01 | 100.0% | 28.3% |
| 3681859 | 5069.1.3.54 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Per1 | 0.73 | 61.0 | 4.88e-01 | 98.3% | 46.4% |
| 4959191 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.72 | 61.0 | 5.37e-01 | 100.0% | 74.4% |
| 3740118 | 4336.2.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 | 0.71 | 56.0 | 4.77e-01 | 86.2% | 87.4% |
| 3624309 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.71 | 61.0 | 4.70e-01 | 98.3% | 86.7% |
| 5069130 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.71 | 54.0 | 5.78e-01 | 84.5% | 96.0% |
| 3262519 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 58.0 | 4.11e-01 | 98.3% | 28.4% |
| 3598977 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 58.0 | 5.21e-01 | 96.6% | 92.9% |
| 4081214 | 605.1.1.290 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Phage_Nu1 | 0.70 | 61.0 | 5.82e-01 | 100.0% | 87.1% |
| 5046748 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 61.0 | 5.76e-01 | 100.0% | 84.3% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 54.0 | 4.98e-01 | 86.2% | 69.3% |
| 3408346 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.68 | 53.0 | 4.90e-01 | 86.2% | 80.0% |
| 4029754 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 56.0 | 5.02e-01 | 98.3% | 95.3% |
| 4547274 | 3714.1.1.0 ↗ | a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain | 0.66 | 55.0 | 4.77e-01 | 100.0% | 60.0% |
| 3419469 | 3444.2.1.0 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain | 0.66 | 47.0 | 4.84e-01 | 75.9% | 78.2% |
| 4436943 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.66 | 51.0 | 4.60e-01 | 84.5% | 70.0% |
| 3973453 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.66 | 53.0 | 4.78e-01 | 91.4% | 65.0% |
| 4964387 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.65 | 56.0 | 4.75e-01 | 100.0% | 59.0% |
| 4026684 | 192.20.1.7 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 | 0.65 | 55.0 | 4.51e-01 | 96.6% | 52.4% |
| 3212581 | 148.1.3.289 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PKK | 0.64 | 53.0 | 5.33e-01 | 100.0% | 96.7% |
| 5008545 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 54.0 | 5.21e-01 | 98.3% | 89.2% |
| 3213526 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.62 | 53.0 | 4.40e-01 | 98.3% | 54.3% |
| 3567670 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.61 | 52.0 | 4.58e-01 | 98.3% | 63.3% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 42.0 | 3.98e-01 | 77.6% | 72.0% |
| 3925617 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.59 | 50.0 | 4.54e-01 | 100.0% | 68.2% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.59 | 51.0 | 4.43e-01 | 98.3% | 63.3% |
| 5046057 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 49.0 | 4.80e-01 | 98.3% | 87.7% |
| 3344575 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.59 | 49.0 | 3.50e-01 | 98.3% | 31.3% |
| 4568749 | 2004.1.1.585 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23 | 0.57 | 49.0 | 3.09e-01 | 100.0% | 17.1% |
| 3488979 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.55 | 47.0 | 3.73e-01 | 98.3% | 48.0% |