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MK686068.1__QBZ73337.1__SEA_REMUSLOOPIN_23__00023
Bact-VirMK686068.1__QBZ73337.1__SEA_REMUSLOOPIN_23__00023
Identity
- Accession:
- MK686068 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Sebastisaurusvirus›
Streptomyces_phage_RemusLoopin
TaxID: 2562346
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-68
Domain cluster:
rep: MK305888.1__QAX92809.1__SEA_AUSTINTATIOUS_48__00048__D70-137
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k3yA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 3.27e-01 | 71.2% | 87.8% |
| 2js3A01 | 1.10.287.780 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains | 0.56 | 33.0 | 3.09e-01 | 86.4% | 42.1% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.55 | 38.0 | 2.32e-01 | 71.2% | 32.0% |
| 2p39A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 40.0 | 3.11e-01 | 81.4% | 83.8% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 44.0 | 3.44e-01 | 100.0% | 90.6% |
| 2napA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.51 | 33.0 | 3.38e-01 | 78.0% | 69.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3858084 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.65 | 52.0 | 4.07e-01 | 93.2% | 52.9% |
| 5075187 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.59 | 40.0 | 4.01e-01 | 71.2% | 93.3% |
| 5055863 | 304.135.1.0 ↗ | a+b two layers › Alpha-beta plaits › O-phosphoseryl-tRNA synthetase C-terminal domain › O-phosphoseryl-tRNA synthetase C-terminal domain | 0.56 | 46.0 | 3.34e-01 | 94.9% | 57.2% |
| 5037310 | 304.135.1.0 ↗ | a+b two layers › Alpha-beta plaits › O-phosphoseryl-tRNA synthetase C-terminal domain › O-phosphoseryl-tRNA synthetase C-terminal domain | 0.53 | 43.0 | 3.15e-01 | 96.6% | 56.4% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.53 | 37.0 | 3.76e-01 | 74.6% | 93.3% |
| 4873985 | 6.1.1.11 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin | 0.50 | 42.0 | 3.31e-01 | 98.3% | 83.5% |
D2
high
residues 257-414
Domain cluster:
rep: MG593803.1__AUG87290.1__SEA_ROWA_26__00026__D240-377
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25746.2 best | Phage_Repressor_c | 168.1 | 4.90e-49 | 100.0% | 39.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.58 | 37.0 | 3.71e-01 | 89.9% | 61.2% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 34.0 | 3.51e-01 | 91.1% | 61.7% |
| 2r8qA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.54 | 44.0 | 3.53e-01 | 89.2% | 56.1% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 28.0 | 3.31e-01 | 94.3% | 74.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4594465 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.64 | 38.0 | 4.69e-01 | 89.2% | 96.8% |
| 3864211 | 109.4.1.471 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GCFC | 0.57 | 48.0 | 3.51e-01 | 89.2% | 90.6% |
| 3784891 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.54 | 34.0 | 3.59e-01 | 94.3% | 70.0% |
D3
medium
residues 89-150
Domain cluster:
rep: pig_ID_3158_F95_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00131__D5-73
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.83 | 64.0 | 4.61e-01 | 82.3% | 48.5% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.81 | 64.0 | 5.69e-01 | 83.9% | 95.3% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.74 | 66.0 | 6.03e-01 | 100.0% | 93.9% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 57.0 | 5.16e-01 | 88.7% | 100.0% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 54.0 | 4.74e-01 | 93.5% | 57.4% |
| 3u02A01 | 3.30.70.2200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 57.0 | 4.44e-01 | 96.8% | 87.5% |
| 4gs7C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 57.0 | 4.88e-01 | 93.5% | 61.2% |
| 2cg8B02 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.67 | 53.0 | 4.26e-01 | 90.3% | 74.2% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.67 | 57.0 | 5.11e-01 | 100.0% | 75.0% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 54.0 | 4.75e-01 | 93.5% | 61.1% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 53.0 | 4.57e-01 | 93.5% | 57.8% |
| 2e3vA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 54.0 | 4.61e-01 | 93.5% | 58.3% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 54.0 | 4.61e-01 | 93.5% | 58.8% |
| 4lsdF00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 53.0 | 4.61e-01 | 93.5% | 58.2% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 53.0 | 4.47e-01 | 93.5% | 54.9% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.64 | 53.0 | 4.79e-01 | 100.0% | 70.2% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 55.0 | 4.44e-01 | 98.4% | 78.2% |
| 3pieC01 | 3.40.50.12390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 47.0 | 3.18e-01 | 83.9% | 79.3% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.62 | 51.0 | 4.35e-01 | 95.2% | 63.0% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.62 | 51.0 | 3.87e-01 | 98.4% | 60.5% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.62 | 45.0 | 3.88e-01 | 82.3% | 46.8% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.59 | 42.0 | 4.49e-01 | 82.3% | 98.0% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 50.0 | 3.50e-01 | 100.0% | 29.1% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.06e-01 | 93.5% | 67.9% |
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 47.0 | 4.08e-01 | 93.5% | 69.8% |
| 5f1cA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.58 | 49.0 | 3.24e-01 | 100.0% | 69.0% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 3.87e-01 | 95.2% | 63.0% |
| 2olsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 48.0 | 3.68e-01 | 93.5% | 94.4% |
| 6grqA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.19e-01 | 95.2% | 60.6% |
| 5xbfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 39.0 | 3.49e-01 | 80.6% | 50.6% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.56 | 38.0 | 2.86e-01 | 71.0% | 86.3% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 40.0 | 4.12e-01 | 80.6% | 96.4% |
| 2je8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 3.20e-01 | 93.5% | 61.5% |
| 3pl0B00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.54 | 41.0 | 2.81e-01 | 85.5% | 30.2% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 3.73e-01 | 93.5% | 58.9% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 42.0 | 3.61e-01 | 91.9% | 86.1% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 41.0 | 3.06e-01 | 83.9% | 69.1% |
| 4cvuA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 43.0 | 3.06e-01 | 93.5% | 60.3% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.52 | 37.0 | 2.84e-01 | 100.0% | 29.3% |
| 1c4pC00 | 3.10.20.180 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 43.0 | 3.46e-01 | 95.2% | 88.6% |
| 1jnrA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.59e-01 | 90.3% | 40.1% |
| 3ed3B02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 36.0 | 2.81e-01 | 77.4% | 54.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.79 | 58.0 | 5.58e-01 | 77.4% | 98.6% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.77 | 60.0 | 5.63e-01 | 83.9% | 98.7% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.77 | 56.0 | 5.38e-01 | 77.4% | 100.0% |
| 5026897 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.77 | 55.0 | 4.64e-01 | 75.8% | 60.0% |
| 5070107 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.75 | 53.0 | 5.17e-01 | 75.8% | 100.0% |
| 5022263 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.70 | 50.0 | 4.12e-01 | 75.8% | 99.1% |
| 3613640 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 59.0 | 3.86e-01 | 98.4% | 46.3% |
| 3477039 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.69 | 62.0 | 4.80e-01 | 100.0% | 81.5% |
| 3405569 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.69 | 51.0 | 4.16e-01 | 80.6% | 43.6% |
| 5075866 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 56.0 | 5.22e-01 | 91.9% | 100.0% |
| 4974741 | 304.125.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins | 0.69 | 58.0 | 5.31e-01 | 96.8% | 98.8% |
| 3231713 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 47.0 | 4.16e-01 | 80.6% | 48.9% |
| 3980369 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.68 | 55.0 | 4.66e-01 | 88.7% | 100.0% |
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.67 | 57.0 | 5.81e-01 | 96.8% | 96.7% |
| 3277423 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.66 | 56.0 | 4.37e-01 | 100.0% | 78.0% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.66 | 50.0 | 5.21e-01 | 85.5% | 90.9% |
| 3722170 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.66 | 53.0 | 3.96e-01 | 91.9% | 85.9% |
| 1734768 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.66 | 51.0 | 5.28e-01 | 98.4% | 91.4% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.64 | 48.0 | 4.80e-01 | 82.3% | 100.0% |
| 3196591 | 11.1.1.871 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 | 0.64 | 54.0 | 3.92e-01 | 93.5% | 68.2% |
| 4946939 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.63 | 55.0 | 3.87e-01 | 100.0% | 90.5% |
| 3944178 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 54.0 | 4.45e-01 | 98.4% | 95.7% |
| 5037079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 5.15e-01 | 93.5% | 96.9% |
| 4378815 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.62 | 52.0 | 4.58e-01 | 96.8% | 74.7% |
| 4212253 | 304.150.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA | 0.62 | 46.0 | 4.05e-01 | 80.6% | 97.8% |
| 4967778 | 329.1.1.2 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 | 0.61 | 46.0 | 3.91e-01 | 90.3% | 47.3% |
| 4927165 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.60 | 47.0 | 4.97e-01 | 95.2% | 100.0% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 44.0 | 3.87e-01 | 82.3% | 74.0% |
| 4930766 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.59 | 51.0 | 4.03e-01 | 100.0% | 61.5% |
| 4024040 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.59 | 51.0 | 5.08e-01 | 100.0% | 95.4% |
| 4935672 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.59 | 51.0 | 3.99e-01 | 100.0% | 57.9% |
| 5047755 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.58 | 49.0 | 3.90e-01 | 100.0% | 59.3% |
| 4954188 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.58 | 49.0 | 3.82e-01 | 100.0% | 54.4% |
| 2056874 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.58 | 41.0 | 3.01e-01 | 75.8% | 74.0% |
| 4596042 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.57 | 40.0 | 2.90e-01 | 72.6% | 94.1% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 41.0 | 4.48e-01 | 79.0% | 98.0% |
| 3218243 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 49.0 | 4.44e-01 | 96.8% | 100.0% |
| 3520350 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.55 | 44.0 | 3.04e-01 | 95.2% | 90.6% |
| 3622516 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 45.0 | 3.92e-01 | 100.0% | 92.7% |
| 4078634 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.55 | 46.0 | 3.09e-01 | 93.5% | 36.8% |
| 3674092 | 2.1.1.68 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C | 0.53 | 44.0 | 3.37e-01 | 95.2% | 85.8% |
| 4946973 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.53 | 43.0 | 2.75e-01 | 93.5% | 38.5% |
| 3799969 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.52 | 38.0 | 2.76e-01 | 83.9% | 56.2% |
| 3258276 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.52 | 41.0 | 2.91e-01 | 93.5% | 28.0% |
| 4165803 | 206.1.3.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP | 0.51 | 40.0 | 2.86e-01 | 87.1% | 90.8% |
| 3816922 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.51 | 43.0 | 2.90e-01 | 100.0% | 60.4% |
| 3213166 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 43.0 | 2.80e-01 | 100.0% | 62.1% |
D4
medium
residues 522-576
Domain cluster:
representative