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MK689364.1__QBZ70718.1__pETSU_137__00137

Bact-Vir

MK689364.1__QBZ70718.1__pETSU_137__00137

Identity

Accession:
MK689364 ↗
Kingdom:
phage

Quality

78.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-82
PDB
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.73 64.0 5.64e-01 98.4% 85.7%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.71 63.0 5.62e-01 100.0% 80.5%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.70 62.0 3.93e-01 100.0% 30.1%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 62.0 5.79e-01 100.0% 85.5%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 61.0 4.71e-01 100.0% 70.9%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.69 61.0 4.72e-01 100.0% 50.4%
2l4vA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 59.0 4.67e-01 100.0% 68.9%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 60.0 4.85e-01 100.0% 90.8%
4q0yA00 2.60.40.4400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 51.0 4.04e-01 82.3% 77.9%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.68 53.0 5.28e-01 93.5% 84.1%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 58.0 4.45e-01 100.0% 89.2%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 54.0 5.01e-01 100.0% 70.4%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 59.0 5.46e-01 100.0% 93.7%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 59.0 4.63e-01 100.0% 75.8%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 58.0 4.85e-01 100.0% 91.8%
1st8A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 57.0 3.63e-01 100.0% 28.8%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.67 56.0 4.52e-01 98.4% 47.6%
3atsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 56.0 4.62e-01 98.4% 98.3%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.65 55.0 4.54e-01 100.0% 82.1%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.64 45.0 3.51e-01 79.0% 32.9%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 55.0 4.63e-01 100.0% 88.4%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 54.0 4.48e-01 100.0% 96.7%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 5.12e-01 100.0% 87.9%
2ozoA04 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 48.0 4.36e-01 85.5% 94.4%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 55.0 4.62e-01 100.0% 90.8%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.63 54.0 4.27e-01 100.0% 58.1%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.63 53.0 3.43e-01 100.0% 23.0%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 54.0 3.38e-01 100.0% 21.6%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.46e-01 100.0% 86.5%
2qguA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.58e-01 100.0% 95.0%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.61 52.0 3.30e-01 100.0% 20.9%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 47.0 3.10e-01 83.9% 41.6%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 46.0 4.08e-01 88.7% 54.1%
2g30A01 2.60.40.1150 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 3.61e-01 77.4% 68.4%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 3.87e-01 100.0% 43.9%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 46.0 3.02e-01 100.0% 18.8%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.70e-01 96.8% 47.7%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.56 45.0 3.49e-01 93.5% 64.1%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 3.79e-01 100.0% 86.3%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 3.94e-01 82.3% 89.7%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.39e-01 90.3% 41.0%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.61e-01 96.8% 47.7%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.56 47.0 4.13e-01 95.2% 81.9%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 41.0 3.21e-01 82.3% 44.3%
7jrmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.14e-01 87.1% 81.1%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.55 46.0 4.21e-01 100.0% 73.3%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.55 47.0 4.00e-01 100.0% 80.2%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.55 43.0 3.56e-01 91.9% 55.2%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.50e-01 95.2% 69.9%
1dzkA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.54e-01 96.8% 48.0%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.24e-01 90.3% 90.6%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.53 42.0 3.23e-01 83.9% 65.0%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 45.0 3.53e-01 100.0% 45.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 4.34e-01 96.8% 92.1%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.41e-01 100.0% 45.5%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 38.0 2.98e-01 82.3% 89.0%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 44.0 3.06e-01 100.0% 28.8%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
178803 243.3.1.9 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YebF 0.73 64.0 5.64e-01 98.4% 85.7%
3742540 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.69 61.0 3.64e-01 100.0% 18.9%
3057329 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.69 53.0 3.57e-01 83.9% 37.8%
3587998 243.1.1.102 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF28180 0.69 60.0 5.10e-01 100.0% 91.4%
4014375 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.69 51.0 5.47e-01 80.6% 100.0%
4953412 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.68 56.0 4.59e-01 98.4% 47.2%
3684759 331.3.1.10 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.68 60.0 4.39e-01 100.0% 38.2%
4950462 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 52.0 5.34e-01 85.5% 88.3%
3706741 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.68 58.0 3.94e-01 100.0% 26.1%
3483806 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.68 46.0 3.47e-01 80.6% 29.3%
4929282 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 58.0 5.50e-01 100.0% 94.7%
4977517 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.67 54.0 5.09e-01 95.2% 73.3%
3703043 5.1.4.597 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_3 0.67 57.0 3.73e-01 100.0% 29.2%
3713323 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.66 58.0 3.96e-01 100.0% 43.9%
4929919 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 57.0 4.99e-01 100.0% 94.7%
4582733 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 57.0 4.54e-01 100.0% 77.7%
1949089 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 57.0 4.59e-01 100.0% 77.6%
3241827 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.65 56.0 4.56e-01 100.0% 83.9%
2605238 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 56.0 4.75e-01 100.0% 94.4%
4949068 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.64 54.0 4.60e-01 98.4% 96.4%
4568161 283.2.1.18 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Lipoprotein_17 0.64 48.0 4.47e-01 85.5% 63.7%
5008812 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.64 49.0 4.17e-01 85.5% 75.2%
4926997 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.63 54.0 4.64e-01 100.0% 98.1%
224067 6098.1.1.1 a+b two layers › BACOVA_05496-like › BACOVA_05496-like › BACOVA_05496-like › DUF4738 0.63 54.0 4.27e-01 100.0% 58.1%
4930408 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 52.0 4.50e-01 95.2% 98.0%
5015593 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.62 45.0 3.62e-01 87.1% 39.2%
3500048 206.1.1.17 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.61 50.0 3.20e-01 91.9% 29.2%
3810782 5.1.5.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 0.61 51.0 3.31e-01 100.0% 38.8%
3387925 243.4.1.0 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.61 51.0 5.05e-01 98.4% 96.9%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.60 44.0 4.15e-01 80.6% 66.3%
4978676 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.60 44.0 4.11e-01 80.6% 65.0%
3586372 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.59 47.0 3.12e-01 90.3% 30.2%
4399538 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.59 45.0 3.82e-01 83.9% 75.5%
4168380 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.59 49.0 4.00e-01 100.0% 83.8%
3893883 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.58 45.0 2.94e-01 88.7% 26.6%
5076916 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.58 49.0 3.91e-01 98.4% 79.9%
3832653 331.3.1.1 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.58 49.0 3.69e-01 100.0% 38.1%
3616741 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 44.0 3.24e-01 80.6% 32.3%
4930177 11.1.1.1443 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29994 0.57 44.0 3.57e-01 85.5% 42.4%
3496018 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 48.0 2.89e-01 100.0% 18.6%
5036065 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 46.0 4.47e-01 100.0% 89.3%
3171541 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.56 47.0 3.86e-01 100.0% 62.0%
6384 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.56 46.0 3.79e-01 100.0% 86.3%
2644388 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 47.0 3.81e-01 100.0% 82.3%
4002646 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 3.06e-01 95.2% 40.8%
5056353 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 45.0 3.02e-01 91.9% 30.8%
3852952 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.53 40.0 3.80e-01 85.5% 91.3%
4499094 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 47.0 4.05e-01 100.0% 62.0%
5000965 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.53 43.0 3.97e-01 100.0% 75.6%
3240191 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.52 45.0 3.65e-01 100.0% 77.6%
3712657 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.51 36.0 2.89e-01 77.4% 59.3%
3386946 9.1.1.11 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.50 41.0 3.25e-01 98.4% 46.3%