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MK689364.1__QBZ70746.1__pETSU_165__00165

Bact-Vir

MK689364.1__QBZ70746.1__pETSU_165__00165

Identity

Accession:
MK689364 ↗
Kingdom:
phage

Quality

71.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Petsuvirus› Edwardsiella_phage_pEt-SU

TaxID: 2562142

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-94
PDB
Domain cluster: rep: OR493421.1__WNY41096.1__X__00212__D3-63
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 40.0 4.56e-01 77.6% 94.8%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 4.41e-01 81.2% 98.9%
4pz6A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.58 44.0 3.26e-01 81.2% 86.9%
1k3rA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 38.0 4.39e-01 72.9% 98.3%
3cp0A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 4.44e-01 71.8% 100.0%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 4.20e-01 74.1% 100.0%
2cqoA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 42.0 4.17e-01 83.5% 98.9%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 37.0 3.76e-01 90.6% 69.9%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.84e-01 84.7% 52.6%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 4.24e-01 70.6% 100.0%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 4.23e-01 71.8% 98.4%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 44.0 4.00e-01 95.3% 84.6%
3nswA00 2.40.50.780 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 41.0 3.86e-01 82.4% 91.5%
4npsA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 34.0 3.89e-01 88.2% 94.8%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 43.0 3.84e-01 95.3% 87.8%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 4.26e-01 82.4% 98.6%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 42.0 3.81e-01 95.3% 82.0%
1go3E01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 4.19e-01 91.8% 100.0%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 40.0 4.08e-01 85.9% 94.2%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 28.0 3.21e-01 71.8% 71.0%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.50 29.0 3.28e-01 70.6% 76.6%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4978946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 42.0 4.87e-01 80.0% 96.7%
3262367 2.1.1.103 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PHA02142 0.61 43.0 3.66e-01 75.3% 92.7%
4945723 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 41.0 3.95e-01 70.6% 100.0%
4975151 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 36.0 4.33e-01 74.1% 92.7%
4974246 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.60 42.0 3.68e-01 71.8% 100.0%
4974478 2.1.1.379 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26045 0.59 41.0 3.80e-01 70.6% 76.2%
5026953 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.59 43.0 3.81e-01 76.5% 100.0%
4944219 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.58 43.0 3.76e-01 77.6% 98.4%
5072770 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 45.0 4.88e-01 83.5% 100.0%
4399115 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.57 38.0 4.27e-01 70.6% 100.0%
4567567 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.56 39.0 3.65e-01 72.9% 61.1%
3710725 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 44.0 2.85e-01 87.1% 48.2%
4206084 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.56 46.0 3.89e-01 92.9% 95.3%
1698227 2.1.1.103 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PHA02142 0.55 36.0 4.17e-01 80.0% 96.6%
5035697 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 39.0 4.39e-01 84.7% 98.5%
1082804 227.1.1.13 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc 0.54 44.0 3.82e-01 94.1% 88.4%
4940968 2.14.1.1 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC 0.54 39.0 3.27e-01 77.6% 91.5%
4990774 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 44.0 4.04e-01 88.2% 98.2%
4376273 2.14.1.1 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC 0.54 37.0 3.70e-01 74.1% 67.8%
143318 2.1.1.114 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › AceES-2 0.54 41.0 3.86e-01 82.4% 91.5%
4153967 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 42.0 3.86e-01 85.9% 92.9%
4991697 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.53 44.0 4.04e-01 91.8% 94.7%
4581970 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 42.0 3.61e-01 85.9% 89.5%
4006143 3943.1.1.5 ↗ beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N 0.52 38.0 3.72e-01 78.8% 69.5%
4980462 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 42.0 3.80e-01 92.9% 87.2%
4125419 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 41.0 3.58e-01 87.1% 96.9%
4987937 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 40.0 3.57e-01 85.9% 93.6%
3416283 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.62e-01 91.8% 27.8%
4208811 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.50 39.0 3.95e-01 84.7% 92.9%