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MK689364.1__QBZ70754.1__pETSU_173__00173
Bact-VirMK689364.1__QBZ70754.1__pETSU_173__00173
Identity
- Accession:
- MK689364 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
TaxID: 2562142
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-80_203-212
Domain cluster:
rep: ON287375.1__UQT03322.1__YUBABA_01160__00116__D7-77
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.67 | 41.0 | 3.85e-01 | 88.1% | 49.5% |
| 1q40D00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 54.0 | 4.32e-01 | 100.0% | 92.0% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.59 | 46.0 | 3.61e-01 | 84.5% | 64.1% |
| 1g8kC01 | 2.60.40.4210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 3.54e-01 | 71.4% | 89.7% |
| 4tw1B00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.56 | 38.0 | 2.67e-01 | 70.2% | 74.5% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 40.0 | 2.51e-01 | 77.4% | 28.9% |
| 2ltsA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 37.0 | 3.76e-01 | 95.2% | 73.3% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.51 | 40.0 | 3.65e-01 | 88.1% | 94.9% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 43.0 | 3.00e-01 | 94.0% | 93.7% |
| 2db5A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.50 | 40.0 | 3.48e-01 | 86.9% | 69.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 44.0 | 4.78e-01 | 97.6% | 82.6% |
| 3902438 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 39.0 | 3.73e-01 | 96.4% | 54.4% |
| 3836411 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.59 | 30.0 | 3.46e-01 | 91.7% | 65.0% |
| 3721570 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.59 | 45.0 | 4.12e-01 | 81.0% | 70.0% |
| 3265494 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 32.0 | 3.88e-01 | 82.1% | 100.0% |
| 3276567 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 43.0 | 3.03e-01 | 84.5% | 69.8% |
| 3735201 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.56 | 42.0 | 3.53e-01 | 81.0% | 62.5% |
| 4020694 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.55 | 43.0 | 2.96e-01 | 86.9% | 24.0% |
| 3205897 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.55 | 43.0 | 2.91e-01 | 85.7% | 22.8% |
| 4129336 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.55 | 41.0 | 3.39e-01 | 79.8% | 58.7% |
| 3383781 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.54 | 32.0 | 4.00e-01 | 96.4% | 100.0% |
| 3798333 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 39.0 | 2.60e-01 | 77.4% | 25.6% |
| 3955346 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.54 | 38.0 | 2.88e-01 | 97.6% | 31.0% |
| 5047479 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 42.0 | 3.86e-01 | 84.5% | 75.5% |
| 3957486 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.54 | 46.0 | 4.18e-01 | 100.0% | 86.7% |
| 4990993 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.53 | 35.0 | 3.97e-01 | 88.1% | 95.0% |
| 3780198 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.57e-01 | 100.0% | 10.3% |
| 4971059 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.53 | 45.0 | 3.36e-01 | 95.2% | 99.1% |
| 3175939 | 5.1.3.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 | 0.52 | 46.0 | 2.94e-01 | 100.0% | 25.6% |
| 3431863 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.51 | 46.0 | 3.15e-01 | 100.0% | 29.7% |
D2
high
residues 83-176
Domain cluster:
rep: ON287375.1__UQT03322.1__YUBABA_01160__00116__D83-175