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MK721189.1__QBZ69262.1__X__00064
Bact-VirMK721189.1__QBZ69262.1__X__00064
Identity
- Accession:
- MK721189 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 2546635
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.85 | 76.0 | 7.39e-01 | 100.0% | 88.5% |
| 3h6pC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.84 | 68.0 | 6.82e-01 | 87.5% | 98.2% |
| 2nr5A00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.83 | 71.0 | 7.09e-01 | 94.6% | 100.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.81 | 72.0 | 5.76e-01 | 100.0% | 67.3% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.77 | 66.0 | 6.14e-01 | 100.0% | 87.8% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.76 | 56.0 | 5.13e-01 | 78.6% | 70.3% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.75 | 61.0 | 5.60e-01 | 96.4% | 68.4% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.75 | 65.0 | 5.64e-01 | 96.4% | 68.2% |
| 2q1kA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.75 | 61.0 | 6.32e-01 | 98.2% | 100.0% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.75 | 55.0 | 5.90e-01 | 98.2% | 93.6% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.74 | 64.0 | 5.09e-01 | 100.0% | 74.2% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.74 | 62.0 | 5.93e-01 | 94.6% | 83.1% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.74 | 59.0 | 5.84e-01 | 85.7% | 100.0% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 63.0 | 5.48e-01 | 100.0% | 96.6% |
| 2ieqA00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.73 | 64.0 | 5.52e-01 | 100.0% | 97.7% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 65.0 | 6.25e-01 | 100.0% | 89.1% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.73 | 56.0 | 5.26e-01 | 94.6% | 67.6% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 64.0 | 5.04e-01 | 100.0% | 66.9% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.72 | 65.0 | 5.87e-01 | 100.0% | 80.0% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 64.0 | 5.65e-01 | 100.0% | 75.3% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.71 | 55.0 | 5.36e-01 | 91.1% | 78.7% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 62.0 | 5.61e-01 | 100.0% | 75.3% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.71 | 57.0 | 5.70e-01 | 96.4% | 86.4% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 60.0 | 5.03e-01 | 100.0% | 57.8% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 61.0 | 5.67e-01 | 100.0% | 87.3% |
| 7cosB02 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.68 | 51.0 | 4.67e-01 | 82.1% | 62.3% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.68 | 59.0 | 5.69e-01 | 100.0% | 92.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 57.0 | 5.31e-01 | 100.0% | 97.3% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 59.0 | 5.27e-01 | 100.0% | 86.4% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 60.0 | 5.39e-01 | 100.0% | 75.3% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 49.0 | 4.46e-01 | 82.1% | 57.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 5.49e-01 | 94.6% | 93.5% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 51.0 | 5.10e-01 | 98.2% | 91.1% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 50.0 | 5.36e-01 | 100.0% | 95.9% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.64 | 46.0 | 4.50e-01 | 85.7% | 69.4% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 53.0 | 3.76e-01 | 94.6% | 95.0% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 53.0 | 4.99e-01 | 100.0% | 77.0% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 52.0 | 5.09e-01 | 100.0% | 90.5% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 51.0 | 4.43e-01 | 100.0% | 66.3% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 51.0 | 4.67e-01 | 96.4% | 80.3% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 43.0 | 4.63e-01 | 78.6% | 97.8% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.58 | 49.0 | 4.12e-01 | 98.2% | 57.4% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 45.0 | 4.65e-01 | 85.7% | 96.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398855 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.85 | 72.0 | 7.33e-01 | 100.0% | 94.5% |
| 3750377 | 605.1.1.254 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MRVI1 | 0.84 | 75.0 | 6.67e-01 | 100.0% | 71.2% |
| 3278686 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.80 | 71.0 | 6.11e-01 | 100.0% | 62.2% |
| 3209563 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.79 | 68.0 | 4.18e-01 | 100.0% | 16.9% |
| 3475201 | 3652.1.1.2 ↗ | alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › STAR_dimer | 0.77 | 66.0 | 6.50e-01 | 94.6% | 95.0% |
| 3972992 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 65.0 | 6.26e-01 | 100.0% | 87.7% |
| 3449084 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.75 | 64.0 | 5.31e-01 | 100.0% | 66.7% |
| 3838316 | 3567.1.1.150 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › H-kinase_dim | 0.73 | 66.0 | 5.94e-01 | 100.0% | 81.3% |
| 3386373 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.73 | 65.0 | 6.22e-01 | 100.0% | 93.8% |
| 3714244 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.71 | 63.0 | 6.18e-01 | 100.0% | 93.3% |
| 4645372 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.70 | 62.0 | 5.23e-01 | 100.0% | 60.0% |
| 3849639 | 192.1.1.38 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF4527 | 0.70 | 58.0 | 5.73e-01 | 92.9% | 88.3% |
| 2636640 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.70 | 58.0 | 5.24e-01 | 92.9% | 71.4% |
| 4648077 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.67 | 57.0 | 3.71e-01 | 100.0% | 21.8% |
| 3215346 | 397.7.1.0 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 | 0.66 | 52.0 | 5.38e-01 | 91.1% | 98.0% |
| 3528259 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.64 | 57.0 | 5.30e-01 | 100.0% | 97.1% |
| 1007238 | 3846.1.1.1 ↗ | alpha bundles › IcmR › IcmR › IcmR › IcmR | 0.63 | 52.0 | 5.15e-01 | 96.4% | 96.6% |