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MK721190.1__QBZ69331.1__X__00032

Bact-Vir

MK721190.1__QBZ69331.1__X__00032

Identity

Accession:
MK721190 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-68
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jmoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.76 62.0 4.67e-01 89.1% 76.7%
1nycA00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.73 56.0 4.67e-01 92.2% 47.7%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 64.0 4.06e-01 100.0% 53.0%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.73 50.0 3.83e-01 71.9% 50.0%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.71 55.0 4.20e-01 82.8% 81.8%
5x7qA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.71 57.0 3.85e-01 87.5% 92.9%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 62.0 3.90e-01 100.0% 44.7%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 54.0 4.24e-01 87.5% 90.1%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.69 47.0 4.00e-01 71.9% 54.2%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.69 51.0 4.73e-01 79.7% 76.5%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 60.0 3.79e-01 100.0% 34.8%
4ifdE00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.67 48.0 3.16e-01 76.6% 38.6%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 49.0 3.96e-01 79.7% 79.2%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 49.0 4.07e-01 82.8% 93.3%
2y24A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 50.0 4.24e-01 82.8% 91.6%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 53.0 3.26e-01 89.1% 25.8%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.65 52.0 4.27e-01 87.5% 50.9%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 45.0 3.82e-01 73.4% 61.5%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.64 44.0 3.87e-01 71.9% 80.9%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.64 51.0 3.92e-01 87.5% 54.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 53.0 4.05e-01 93.8% 57.8%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 47.0 4.23e-01 81.2% 100.0%
2wgoA00 3.10.450.260 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 44.0 3.94e-01 76.6% 50.0%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.62 49.0 4.05e-01 82.8% 97.2%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.62 53.0 4.16e-01 93.8% 82.6%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 47.0 3.68e-01 82.8% 40.4%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.62 54.0 3.94e-01 100.0% 42.9%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.62 48.0 4.51e-01 84.4% 84.8%
2xp1A02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 43.0 4.01e-01 73.4% 75.0%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.61 47.0 3.43e-01 84.4% 29.9%
3p02A02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.60 45.0 3.44e-01 82.8% 52.8%
1iyxA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 43.0 3.57e-01 79.7% 99.2%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 45.0 3.52e-01 84.4% 69.6%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 46.0 3.99e-01 82.8% 70.8%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.59 49.0 3.50e-01 100.0% 62.1%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.59 49.0 4.39e-01 92.2% 67.4%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.91e-01 78.1% 100.0%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 47.0 3.97e-01 89.1% 64.8%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.57 45.0 3.99e-01 95.3% 58.5%
4b9gA00 2.60.40.3480 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 3.14e-01 75.0% 46.6%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 4.02e-01 95.3% 87.7%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 42.0 3.09e-01 81.2% 76.7%
3uueA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 49.0 3.24e-01 100.0% 83.2%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 48.0 4.29e-01 96.9% 89.0%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.56 40.0 3.82e-01 79.7% 88.6%
4kujA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 3.38e-01 89.1% 100.0%
4nn5C01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.69e-01 78.1% 83.3%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 3.60e-01 100.0% 95.4%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.81e-01 93.8% 70.6%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3786448 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.78 70.0 4.30e-01 100.0% 54.7%
3601782 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.77 65.0 4.04e-01 92.2% 54.1%
4380331 295.1.1.27 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.77 70.0 6.78e-01 100.0% 95.7%
4029739 9.8.1.1 beta barrels › Lipocalins/Streptavidin › Dipeptidyl peptidase I (cathepsin C), exclusion domain › Dipeptidyl peptidase I (cathepsin C), exclusion domain › CathepsinC_exc 0.76 62.0 4.97e-01 87.5% 61.7%
3532938 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.76 69.0 4.21e-01 100.0% 49.2%
3618896 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.75 59.0 5.94e-01 90.6% 84.4%
3575356 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 64.0 4.07e-01 96.9% 41.2%
4257113 295.1.1.27 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.74 67.0 6.54e-01 100.0% 95.7%
3853086 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 64.0 4.04e-01 100.0% 40.3%
4142345 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.73 65.0 4.06e-01 100.0% 48.2%
3319850 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.72 64.0 3.94e-01 100.0% 49.3%
3637723 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.72 63.0 3.87e-01 100.0% 31.0%
4016640 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 63.0 3.95e-01 100.0% 48.0%
3694574 5.1.4.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lgl_C 0.71 58.0 3.45e-01 90.6% 31.5%
3645444 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 49.0 4.00e-01 73.4% 93.3%
3265309 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.70 60.0 4.58e-01 95.3% 41.7%
3573723 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.70 63.0 3.69e-01 100.0% 30.1%
3197766 5.1.4.119 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.70 60.0 3.35e-01 93.8% 71.2%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.70 62.0 3.79e-01 100.0% 49.4%
4017127 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 60.0 3.95e-01 96.9% 46.4%
3934570 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 63.0 3.84e-01 100.0% 33.9%
5043479 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 60.0 3.92e-01 96.9% 44.3%
3230195 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 61.0 3.85e-01 100.0% 33.6%
4216416 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 60.0 3.70e-01 100.0% 32.9%
4182291 223.1.1.5 a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.69 55.0 3.59e-01 84.4% 59.2%
4025256 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 56.0 5.22e-01 89.1% 75.0%
3238631 2484.1.1.190 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 0.69 49.0 3.23e-01 78.1% 18.5%
3258441 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.69 51.0 4.88e-01 79.7% 69.3%
3598080 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 60.0 3.80e-01 100.0% 35.1%
1082804 227.1.1.13 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc 0.68 56.0 4.26e-01 89.1% 95.9%
4094199 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 60.0 3.86e-01 100.0% 69.8%
3701349 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 59.0 3.58e-01 100.0% 43.2%
3712023 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 57.0 3.43e-01 95.3% 23.0%
2028017 881.6.1.1 a+b three layers › Mog1p/PsbP-like › FrpD › FrpD › FrpC 0.67 54.0 3.69e-01 87.5% 29.5%
3269042 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.67 61.0 4.96e-01 100.0% 73.0%
3947246 331.3.1.19 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.67 59.0 4.20e-01 100.0% 54.5%
1487355 11.1.1.358 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EEP_ig-like 0.67 52.0 4.33e-01 82.8% 77.6%
3607433 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 59.0 3.53e-01 100.0% 41.5%
3542090 331.9.1.7 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP5B1_C 0.66 46.0 3.88e-01 73.4% 86.4%
3980136 243.3.1.21 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB 0.66 50.0 4.73e-01 81.2% 84.0%
3407569 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 57.0 3.66e-01 100.0% 64.7%
5053933 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 53.0 5.35e-01 89.1% 95.4%
3517016 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 56.0 3.57e-01 96.9% 40.2%
3783252 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 56.0 3.52e-01 100.0% 38.4%
3169437 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 57.0 3.55e-01 100.0% 38.5%
3725709 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.63e-01 96.9% 97.3%
4106800 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.64 51.0 4.48e-01 93.8% 58.9%
3981607 3816.1.1.1 beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD 0.64 49.0 4.56e-01 82.8% 88.7%
2773872 5.1.5.79 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, WDR90_beta-prop_4th 0.64 56.0 3.54e-01 100.0% 31.9%
4056826 3816.1.1.1 beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD 0.64 50.0 4.71e-01 85.9% 88.7%
4027423 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 54.0 3.45e-01 96.9% 52.8%
3061224 12.2.1.5 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Alg17C_C 0.63 44.0 4.52e-01 73.4% 100.0%
3404690 5.1.4.262 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.63 54.0 3.35e-01 98.4% 42.7%
3934097 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.63 50.0 3.90e-01 87.5% 68.6%
3921266 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.62 54.0 3.21e-01 100.0% 43.7%
3505083 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 54.0 3.41e-01 100.0% 58.0%
3476559 5.1.13.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 0.61 54.0 3.40e-01 100.0% 41.7%
4927783 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.60 45.0 3.70e-01 79.7% 96.7%
5009577 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.59 46.0 3.72e-01 84.4% 63.2%
3711360 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.37e-01 100.0% 68.1%
3487050 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 49.0 3.25e-01 100.0% 91.5%
3962288 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 44.0 3.59e-01 85.9% 56.2%
3961519 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 48.0 3.07e-01 100.0% 63.6%
3945059 9.1.1.6 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE 0.54 43.0 3.77e-01 90.6% 78.1%
4459482 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.54 46.0 3.24e-01 96.9% 60.0%
5055383 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.52 37.0 2.83e-01 75.0% 31.9%