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MK721190.1__QBZ69363.1__X__00064

Bact-Vir

MK721190.1__QBZ69363.1__X__00064

Identity

Accession:
MK721190 ↗
Kingdom:
phage

Quality

73.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Efquatrovirus› Enterococcus_phage_vB_EfaS_Ef6.4

TaxID: 2546632

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-72
PDB
Domain cluster: rep: MK095606.1__AZS06355.1__AAS23_gp42__00042__D2-54
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 46.0 3.76e-01 84.3% 73.4%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 47.0 3.89e-01 84.3% 64.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.38e-01 98.6% 97.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 39.0 4.04e-01 95.7% 72.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 38.0 3.98e-01 85.7% 71.2%
4geqB00 3.30.160.430 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 40.0 4.29e-01 97.1% 84.5%
3bexA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 43.0 3.57e-01 81.4% 58.8%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.58 44.0 4.13e-01 82.9% 85.6%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.13e-01 100.0% 82.5%
2auwA01 3.30.2020.10 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain 0.57 44.0 4.23e-01 84.3% 92.7%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.08e-01 100.0% 85.1%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 39.0 3.18e-01 70.0% 49.6%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 42.0 3.78e-01 80.0% 90.7%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.90e-01 90.0% 19.7%
2zutA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 36.0 3.91e-01 94.3% 79.7%
3nbcA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 48.0 3.85e-01 100.0% 93.2%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.93e-01 85.7% 28.9%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.88e-01 85.7% 25.2%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 49.0 4.57e-01 100.0% 84.3%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.55 48.0 3.49e-01 100.0% 47.1%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 43.0 3.82e-01 85.7% 91.5%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 4.43e-01 100.0% 94.9%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.81e-01 94.3% 73.4%
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.55 29.0 3.35e-01 100.0% 78.0%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.88e-01 92.9% 77.8%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 4.05e-01 98.6% 90.9%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 41.0 4.49e-01 100.0% 98.3%
1lu4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 37.0 3.08e-01 72.9% 81.3%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 34.0 3.71e-01 84.3% 80.4%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 3.05e-01 100.0% 89.2%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.40e-01 100.0% 79.3%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.76e-01 100.0% 72.9%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 39.0 4.18e-01 100.0% 91.7%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 40.0 2.72e-01 81.4% 78.3%
3p34A02 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.53 39.0 3.55e-01 100.0% 56.7%
2hczX02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.53 44.0 3.92e-01 94.3% 79.8%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 3.92e-01 94.3% 61.1%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 41.0 4.26e-01 100.0% 90.9%
1ewfA02 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.53 44.0 3.03e-01 97.1% 57.2%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 45.0 2.98e-01 100.0% 32.8%
1ri9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 39.0 3.88e-01 100.0% 74.0%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 3.18e-01 94.3% 84.4%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 43.0 3.25e-01 92.9% 58.3%
1ryp200 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 45.0 3.19e-01 100.0% 79.4%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.24e-01 98.6% 63.9%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.51 40.0 3.86e-01 90.0% 75.6%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 35.0 3.70e-01 98.6% 86.2%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.51 31.0 3.60e-01 84.3% 97.7%
2vvlG01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 2.89e-01 94.3% 84.4%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.50 34.0 3.68e-01 94.3% 87.9%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 2.74e-01 100.0% 25.2%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.50 42.0 3.72e-01 98.6% 87.3%
4ntdA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 3.02e-01 94.3% 82.7%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3601907 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.77 45.0 3.22e-01 78.6% 21.7%
4940641 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 46.0 5.52e-01 75.7% 95.6%
4157389 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.66 45.0 4.64e-01 94.3% 75.4%
3488001 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.66 45.0 2.92e-01 71.4% 42.0%
3924597 330.16.1.0 ↗ a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain 0.65 49.0 4.95e-01 81.4% 87.1%
4353121 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.65 50.0 4.46e-01 82.9% 100.0%
4494033 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.65 44.0 4.42e-01 94.3% 70.0%
5027344 1170.1.1.0 ↗ beta barrels › IL8-related › IL8-related › IL8 0.65 39.0 4.33e-01 97.1% 76.4%
3574409 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.65 50.0 4.64e-01 90.0% 65.6%
3751478 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.64 53.0 5.22e-01 100.0% 86.7%
3945545 4317.1.1.1 ↗ a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 0.62 39.0 4.02e-01 71.4% 67.7%
5068015 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.62 45.0 4.46e-01 87.1% 73.3%
3237475 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.61 50.0 4.86e-01 91.4% 82.1%
3502418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 32.0 4.05e-01 90.0% 100.0%
4302456 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.60 40.0 3.75e-01 100.0% 54.4%
3259583 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.60 49.0 4.75e-01 100.0% 82.5%
4291626 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.59 40.0 3.64e-01 100.0% 51.6%
3554995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 44.0 4.41e-01 100.0% 78.6%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.59 43.0 3.28e-01 100.0% 33.3%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.23e-01 100.0% 85.0%
3924338 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 42.0 4.30e-01 100.0% 78.6%
3893368 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.58 41.0 4.24e-01 100.0% 80.0%
3275832 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.58 40.0 4.38e-01 100.0% 92.7%
3174658 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 45.0 4.13e-01 84.3% 65.6%
4988423 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.57 48.0 4.64e-01 100.0% 83.7%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.57 39.0 3.75e-01 100.0% 60.0%
3899589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 4.48e-01 97.1% 91.7%
3263031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 37.0 3.87e-01 100.0% 72.3%
3478666 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 48.0 4.22e-01 94.3% 65.7%
1289661 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.57 38.0 3.91e-01 100.0% 73.1%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 42.0 4.45e-01 100.0% 91.7%
3879164 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.56 43.0 4.20e-01 100.0% 76.0%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 42.0 4.20e-01 100.0% 78.6%
3933293 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 37.0 3.94e-01 90.0% 81.0%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.18e-01 100.0% 78.6%
2462273 2.2.1.2 ↗ beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Enterotoxin_b 0.56 44.0 3.69e-01 85.7% 78.9%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 42.0 4.33e-01 100.0% 86.2%
3455792 5.1.4.319 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st 0.55 47.0 3.11e-01 97.1% 23.8%
5023580 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 4.40e-01 92.9% 89.2%
3513923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 40.0 3.98e-01 100.0% 73.3%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.55 47.0 3.34e-01 98.6% 30.9%
3496355 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 4.31e-01 97.1% 96.4%
3413864 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 43.0 3.27e-01 100.0% 36.4%
3468385 5.1.4.343 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_WDHD1_1st 0.54 45.0 3.36e-01 97.1% 37.5%
3520903 3864.1.1.0 ↗ extended segments › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 0.54 46.0 2.76e-01 95.7% 19.0%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.54 36.0 3.28e-01 100.0% 49.0%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 40.0 4.02e-01 100.0% 78.6%
3680747 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 2.63e-01 85.7% 31.8%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.28e-01 100.0% 84.3%
3995515 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 47.0 3.10e-01 100.0% 35.1%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.54 36.0 4.00e-01 100.0% 96.0%
3391754 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.54 44.0 3.88e-01 94.3% 68.2%
3266967 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.53 47.0 2.86e-01 100.0% 31.1%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.53 35.0 3.36e-01 97.1% 58.7%
3387155 298.1.1.24 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.53 36.0 2.61e-01 70.0% 75.9%
3914367 5.1.2.44 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_HPS5 0.53 43.0 3.48e-01 94.3% 50.7%
3652079 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.52 36.0 3.03e-01 70.0% 93.9%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.52 36.0 3.87e-01 100.0% 90.9%
3300848 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.52 31.0 2.79e-01 77.1% 37.9%
4003717 4.1.1.50 ↗ beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.52 38.0 3.73e-01 100.0% 73.3%
3700076 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.52 43.0 2.68e-01 91.4% 93.5%
3991453 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 44.0 3.16e-01 100.0% 41.5%
3929257 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.52 45.0 4.33e-01 100.0% 95.0%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.36e-01 100.0% 92.0%
3257938 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.52 37.0 3.91e-01 95.7% 90.0%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.52 35.0 3.64e-01 100.0% 76.9%
4998118 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.51 39.0 4.07e-01 81.4% 92.3%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.86e-01 81.4% 94.5%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.51 42.0 4.32e-01 100.0% 95.4%
3591459 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 41.0 3.91e-01 92.9% 81.2%
D2 medium residues 85-126
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.87 72.0 5.78e-01 100.0% 48.1%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 75.0 6.59e-01 100.0% 79.0%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.84 69.0 5.47e-01 100.0% 45.3%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.83 74.0 5.52e-01 100.0% 55.4%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.83 66.0 6.42e-01 100.0% 80.9%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.82 72.0 5.25e-01 100.0% 92.2%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.82 65.0 5.16e-01 100.0% 43.5%
3m0fB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.82 72.0 5.13e-01 100.0% 34.1%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.82 72.0 6.96e-01 100.0% 91.7%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.82 62.0 5.59e-01 100.0% 60.3%
2lmgA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.82 70.0 5.88e-01 100.0% 62.2%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.81 71.0 5.61e-01 100.0% 56.3%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.81 69.0 5.49e-01 100.0% 47.7%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.80 68.0 5.04e-01 100.0% 37.5%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.79 56.0 4.08e-01 100.0% 28.1%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.78 65.0 4.86e-01 100.0% 36.5%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.76 67.0 5.65e-01 100.0% 64.3%
4aurA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 64.0 3.90e-01 100.0% 15.5%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.75 58.0 5.55e-01 100.0% 74.0%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 63.0 5.36e-01 100.0% 58.9%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.74 58.0 5.21e-01 90.5% 67.7%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 58.0 4.48e-01 100.0% 38.8%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.72 61.0 5.41e-01 100.0% 66.2%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.71 57.0 4.52e-01 100.0% 42.6%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.70 57.0 4.75e-01 95.2% 58.2%
4m52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 56.0 3.57e-01 100.0% 17.6%
5b1aC01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 58.0 5.07e-01 100.0% 60.3%
2g2dA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.69 56.0 3.89e-01 100.0% 26.2%
2o5iN07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.66 56.0 4.17e-01 100.0% 87.1%
4q5qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.66 54.0 4.19e-01 100.0% 40.0%
4cpgA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.65 51.0 4.61e-01 100.0% 62.3%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.65 51.0 3.97e-01 100.0% 76.1%
1vw4501 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.65 52.0 3.22e-01 88.1% 62.0%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 50.0 3.15e-01 100.0% 14.7%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.65 50.0 4.70e-01 100.0% 86.7%
6orkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 53.0 3.36e-01 97.6% 29.4%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.63 54.0 4.73e-01 100.0% 70.8%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.62 54.0 4.87e-01 97.6% 71.9%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.61 46.0 3.71e-01 100.0% 37.7%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 53.0 5.16e-01 100.0% 100.0%
1t07A00 1.10.3880.10 Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX 0.59 50.0 4.03e-01 95.2% 74.1%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.55e-01 97.6% 85.7%
4toiA02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 42.0 4.20e-01 100.0% 91.7%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 44.0 3.67e-01 100.0% 50.0%
1hwyA01 1.10.287.140 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 42.0 4.00e-01 92.9% 78.4%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3626122 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.87 75.0 6.54e-01 100.0% 65.0%
3890614 601.33.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.86 76.0 6.40e-01 100.0% 60.0%
3962991 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 76.0 4.82e-01 100.0% 25.1%
3382780 2006.1.1.8 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5_nucleotid 0.84 75.0 4.33e-01 100.0% 18.0%
4259224 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 74.0 4.92e-01 100.0% 31.6%
3973899 5086.1.1.92 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE 0.82 73.0 4.95e-01 100.0% 89.0%
3607447 633.6.1.2 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.82 71.0 4.69e-01 100.0% 24.7%
3473827 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 70.0 6.28e-01 100.0% 70.0%
3278856 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.81 72.0 6.80e-01 100.0% 98.0%
3282516 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.81 70.0 4.84e-01 100.0% 30.7%
3968781 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.80 70.0 4.77e-01 100.0% 67.6%
184859 192.15.1.3 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core 0.80 70.0 4.62e-01 100.0% 35.7%
3972622 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.79 67.0 5.13e-01 100.0% 42.0%
4463998 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.78 65.0 3.87e-01 100.0% 12.4%
3791357 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.78 66.0 4.43e-01 100.0% 25.5%
3974573 5086.1.1.86 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG 0.78 65.0 4.69e-01 100.0% 32.3%
4010479 325.1.7.48 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25885 0.77 64.0 4.64e-01 100.0% 32.3%
3965957 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.77 64.0 5.43e-01 100.0% 56.0%
3838083 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.77 64.0 5.56e-01 100.0% 60.0%
3638091 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 65.0 3.83e-01 97.6% 37.0%
3974625 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.76 63.0 5.46e-01 100.0% 60.0%
3462885 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.75 64.0 4.18e-01 100.0% 73.0%
3628378 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.74 60.0 4.14e-01 100.0% 26.1%
3254515 6039.1.1.0 ↗ few secondary structure elements › CLIP domain › CLIP domain › CLIP domain 0.73 63.0 6.23e-01 100.0% 93.3%
3622615 604.1.1.172 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › 7TM_GPCR_Srx 0.73 59.0 4.60e-01 100.0% 41.0%
4013484 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.73 58.0 3.76e-01 100.0% 19.0%
3936662 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.71 57.0 3.38e-01 100.0% 12.5%
3942023 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.67 53.0 3.33e-01 100.0% 15.4%
3988454 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.65 49.0 4.49e-01 100.0% 60.0%
3967403 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.65 50.0 4.60e-01 100.0% 64.6%
4146694 192.29.1.277 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin 0.65 50.0 4.60e-01 100.0% 64.6%
3355246 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.62 49.0 4.26e-01 100.0% 53.8%