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MK733261.1__QCW23505.1__X__00037
Bact-VirMK733261.1__QCW23505.1__X__00037
Identity
- Accession:
- MK733261 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-81
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4im9B00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.65 | 45.0 | 3.65e-01 | 72.0% | 84.4% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 46.0 | 3.15e-01 | 85.3% | 50.4% |
| 3n50B02 | 1.10.287.4280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 29.0 | 3.13e-01 | 80.0% | 62.1% |
| 4xs9A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 39.0 | 3.08e-01 | 82.7% | 58.7% |
| 1a6dA03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.50 | 37.0 | 2.97e-01 | 78.7% | 39.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1273201 | 148.1.1.15 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-X | 0.75 | 42.0 | 4.25e-01 | 72.0% | 55.3% |
| 3434123 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 4.17e-01 | 93.3% | 94.1% |
| 3172462 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.54 | 37.0 | 3.25e-01 | 72.0% | 78.3% |
D2
high
residues 86-176
Domain cluster:
rep: LC768468.1__BEH84592.1__X__00031__D22-108
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 43.0 | 4.57e-01 | 93.4% | 83.1% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.58 | 28.0 | 2.59e-01 | 84.6% | 30.9% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 38.0 | 3.58e-01 | 94.5% | 57.5% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.57e-01 | 100.0% | 49.7% |
| 3v76A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 35.0 | 3.53e-01 | 92.3% | 64.4% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 33.0 | 3.62e-01 | 87.9% | 75.0% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 4.30e-01 | 100.0% | 95.8% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.52 | 36.0 | 3.40e-01 | 94.5% | 59.6% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 33.0 | 2.94e-01 | 94.5% | 41.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.57 | 38.0 | 4.21e-01 | 94.5% | 87.1% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 36.0 | 3.28e-01 | 87.9% | 50.0% |
| 5024095 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 39.0 | 2.94e-01 | 95.6% | 30.9% |
| 3283546 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 35.0 | 3.02e-01 | 91.2% | 42.0% |
| 3441143 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.52 | 38.0 | 3.71e-01 | 100.0% | 71.0% |
| 3490317 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 3.44e-01 | 86.8% | 71.9% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 37.0 | 3.86e-01 | 91.2% | 80.0% |
| 3771406 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 41.0 | 3.72e-01 | 85.7% | 88.0% |
| 3626506 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.51 | 41.0 | 3.59e-01 | 87.9% | 65.7% |
| 3555102 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 40.0 | 3.70e-01 | 86.8% | 83.3% |
| 5061425 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.41e-01 | 93.4% | 74.7% |
| 3834563 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.51 | 35.0 | 3.69e-01 | 91.2% | 81.2% |
| 3480564 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.57e-01 | 87.9% | 80.0% |
| 3686517 | 220.1.1.112 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 | 0.50 | 40.0 | 3.32e-01 | 86.8% | 63.6% |
| 3717986 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 36.0 | 3.41e-01 | 95.6% | 60.9% |