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MK733262.1__QCW23344.1__X__00039
Bact-VirMK733262.1__QCW23344.1__X__00039
Identity
- Accession:
- MK733262 ↗
- Kingdom:
- phage
Quality
84.3
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-141
Domain cluster:
rep: CAKLQH020000047.1__CAH1096054.1__SAMEA5780036_03828__00022__D217-310
D2
high
residues 154-345
Domain cluster:
rep: IMGVR_UViG_3300010237_000006-3300010237-Ga0136250_1000002017__D103-269
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22530.3 best | Terminase-T7_RNaseH-like | 30.1 | 6.80e-07 | 59.4% | 80.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ifeA02 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.72 | 68.0 | 6.40e-01 | 100.0% | 95.6% |
| 1kcfB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 57.0 | 5.35e-01 | 85.4% | 78.9% |
| 4ep4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.68 | 52.0 | 5.63e-01 | 84.4% | 92.2% |
| 4c84A00 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.63 | 31.0 | 3.59e-01 | 88.0% | 60.8% |
| 1yvuA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 44.0 | 4.27e-01 | 72.4% | 99.1% |
| 2au3A03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.61 | 36.0 | 4.29e-01 | 96.4% | 87.1% |
| 1pq4A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 32.0 | 4.19e-01 | 97.9% | 94.2% |
| 1yqeA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.59 | 31.0 | 4.18e-01 | 85.4% | 97.9% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.59 | 36.0 | 4.30e-01 | 96.4% | 90.4% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 43.0 | 4.06e-01 | 73.4% | 99.6% |
| 1gkuB05 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 35.0 | 4.33e-01 | 84.4% | 95.0% |
| 1xmxA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.56 | 34.0 | 3.91e-01 | 89.1% | 79.6% |
| 4kp7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 35.0 | 3.87e-01 | 88.5% | 78.7% |
| 3hh8A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 35.0 | 4.11e-01 | 100.0% | 93.1% |
| 1toaA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 36.0 | 4.19e-01 | 100.0% | 96.9% |
| 6mptA01 | 3.30.420.590 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.51 | 34.0 | 3.64e-01 | 78.6% | 75.7% |
| 1hjxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 39.0 | 3.42e-01 | 80.2% | 89.3% |
| 3hl0A01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 33.0 | 3.63e-01 | 77.1% | 79.9% |
| 2qkxA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 43.0 | 3.98e-01 | 90.6% | 88.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964372 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.86 | 72.0 | 7.19e-01 | 100.0% | 85.1% |
| 5002634 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.85 | 74.0 | 7.67e-01 | 100.0% | 95.6% |
| 4974990 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.85 | 70.0 | 7.38e-01 | 100.0% | 93.7% |
| 4975081 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 64.0 | 7.06e-01 | 97.4% | 100.0% |
| 2877581 | 2484.1.1.95 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase-T7_RNaseH-like | 0.80 | 77.0 | 6.83e-01 | 100.0% | 85.8% |
| 5081671 | 2484.1.1.76 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_3C | 0.80 | 67.0 | 6.98e-01 | 100.0% | 92.8% |
| 4256383 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.75 | 48.0 | 5.44e-01 | 90.6% | 82.0% |
| 4954544 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.75 | 67.0 | 6.74e-01 | 100.0% | 93.7% |
| 3258547 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.74 | 52.0 | 5.51e-01 | 92.7% | 80.0% |
| 4122754 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.74 | 50.0 | 5.50e-01 | 91.7% | 81.9% |
| 4051481 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.73 | 47.0 | 5.20e-01 | 90.6% | 80.0% |
| 1695398 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.72 | 69.0 | 6.41e-01 | 100.0% | 95.2% |
| 4110341 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.72 | 50.0 | 5.20e-01 | 92.2% | 75.6% |
| 3367466 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.69 | 51.0 | 5.24e-01 | 91.1% | 78.9% |
| 3784502 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.66 | 51.0 | 5.05e-01 | 93.8% | 76.0% |
| 3631589 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 43.0 | 4.72e-01 | 91.1% | 80.6% |
| 3831392 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.61 | 51.0 | 4.98e-01 | 92.2% | 80.5% |
| 4939526 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.59 | 35.0 | 4.28e-01 | 94.8% | 93.2% |
| 1407540 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.59 | 35.0 | 4.24e-01 | 96.9% | 89.4% |
| 4979587 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.59 | 31.0 | 3.92e-01 | 81.8% | 86.4% |
| 5057690 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.57 | 33.0 | 3.91e-01 | 89.1% | 80.8% |
| 3899311 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 46.0 | 3.45e-01 | 85.4% | 96.6% |
| 4486112 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.56 | 33.0 | 3.95e-01 | 89.6% | 87.2% |
| 5024272 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.53 | 34.0 | 3.97e-01 | 95.8% | 95.2% |
| 2048148 | 2007.1.14.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA | 0.53 | 36.0 | 4.17e-01 | 100.0% | 97.0% |
| 5054010 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.53 | 40.0 | 4.05e-01 | 78.6% | 99.5% |
| 3937265 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.52 | 35.0 | 3.67e-01 | 85.4% | 73.5% |
| 5038813 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 42.0 | 3.92e-01 | 83.9% | 83.8% |
| 5056466 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.51 | 39.0 | 3.93e-01 | 78.6% | 98.4% |
| 4960833 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.51 | 40.0 | 3.70e-01 | 82.3% | 81.6% |
| 5028363 | 2005.1.1.16 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 | 0.51 | 43.0 | 3.99e-01 | 88.0% | 96.2% |
| 4934403 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.51 | 37.0 | 4.11e-01 | 85.9% | 93.5% |
| 4492169 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.50 | 31.0 | 3.27e-01 | 84.4% | 66.5% |