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MK757448.1__QCG78278.1__SEA_IDAHO_13__00013
Bact-VirMK757448.1__QCG78278.1__SEA_IDAHO_13__00013
Identity
- Accession:
- MK757448 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Taxonomy
TaxID: 2565509
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-167
Domain cluster:
rep: MZ333134.1__QXG07748.1__X__00016__D390-489
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.80 | 65.0 | 6.42e-01 | 100.0% | 81.7% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.79 | 65.0 | 6.35e-01 | 100.0% | 80.4% |
| 2fsdA00 | 2.60.40.2460 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage bIL170 RBP, head domain | 0.76 | 65.0 | 6.24e-01 | 100.0% | 80.9% |
| 2vtwA00 | 2.60.90.30 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain | 0.70 | 63.0 | 4.93e-01 | 100.0% | 79.0% |
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.62 | 40.0 | 3.97e-01 | 100.0% | 63.0% |
| 1f0lA03 | 2.60.40.700 | Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain | 0.61 | 50.0 | 4.41e-01 | 100.0% | 58.4% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 50.0 | 5.00e-01 | 92.8% | 99.0% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.59 | 46.0 | 4.70e-01 | 84.5% | 99.0% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 50.0 | 4.31e-01 | 97.9% | 100.0% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 39.0 | 4.39e-01 | 96.9% | 100.0% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.57 | 44.0 | 4.55e-01 | 83.5% | 94.7% |
| 5hbaA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 49.0 | 4.44e-01 | 95.9% | 98.5% |
| 3bqjA01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.57 | 48.0 | 3.90e-01 | 94.8% | 94.9% |
| 2bj0A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.56 | 43.0 | 3.43e-01 | 83.5% | 74.4% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.56 | 43.0 | 3.49e-01 | 84.5% | 73.9% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 46.0 | 4.21e-01 | 92.8% | 99.2% |
| 3km3B00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.56 | 48.0 | 4.17e-01 | 99.0% | 94.2% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 46.0 | 4.33e-01 | 93.8% | 95.9% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.13e-01 | 91.8% | 84.3% |
| 1x9lA01 | 2.60.40.1890 | Mainly Beta › Sandwich › Immunoglobulin-like › PCu(A)C copper chaperone | 0.55 | 41.0 | 3.96e-01 | 100.0% | 68.4% |
| 1owwA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.10e-01 | 91.8% | 82.8% |
| 1rj8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 4.02e-01 | 93.8% | 96.4% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 4.09e-01 | 94.8% | 96.3% |
| 4uxuA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.54 | 41.0 | 3.29e-01 | 83.5% | 71.9% |
| 1o91A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 4.17e-01 | 96.9% | 99.2% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.89e-01 | 100.0% | 81.8% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.01e-01 | 94.8% | 80.4% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.96e-01 | 100.0% | 73.6% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.66e-01 | 81.4% | 72.6% |
| 3zm8A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 44.0 | 4.14e-01 | 97.9% | 100.0% |
| 2dn7A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.78e-01 | 93.8% | 73.8% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.60e-01 | 79.4% | 100.0% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 39.0 | 3.90e-01 | 100.0% | 80.8% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.50 | 41.0 | 2.83e-01 | 94.8% | 64.9% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 35.0 | 3.66e-01 | 73.2% | 86.2% |
| 1n26A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.62e-01 | 85.6% | 85.9% |
| 3weoA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.50 | 38.0 | 2.93e-01 | 84.5% | 77.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 961561 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.80 | 65.0 | 6.45e-01 | 100.0% | 82.5% |
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.79 | 66.0 | 6.23e-01 | 100.0% | 76.1% |
| 3964117 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.67 | 56.0 | 5.64e-01 | 100.0% | 93.7% |
| 5034575 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 39.0 | 4.12e-01 | 75.3% | 72.9% |
| 4881921 | 10.2.1.14 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.61 | 50.0 | 3.60e-01 | 92.8% | 96.7% |
| 4669470 | 12.1.1.108 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › PF29606 | 0.60 | 39.0 | 4.26e-01 | 100.0% | 84.0% |
| 1933304 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 42.0 | 4.33e-01 | 99.0% | 79.5% |
| 4979776 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.60 | 43.0 | 3.19e-01 | 77.3% | 50.2% |
| 3481480 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.59 | 46.0 | 4.61e-01 | 83.5% | 100.0% |
| 4379635 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.59 | 46.0 | 4.70e-01 | 85.6% | 97.9% |
| 5057245 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.58 | 46.0 | 4.73e-01 | 84.5% | 95.6% |
| 4251719 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.58 | 46.0 | 4.65e-01 | 85.6% | 97.9% |
| 4990962 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 4.35e-01 | 99.0% | 83.3% |
| 4932128 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.58 | 45.0 | 4.74e-01 | 83.5% | 100.0% |
| 3886451 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.58 | 48.0 | 4.36e-01 | 94.8% | 95.0% |
| 4984743 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.58 | 44.0 | 4.48e-01 | 82.5% | 96.8% |
| 4337888 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.57 | 45.0 | 4.53e-01 | 86.6% | 94.0% |
| 3229892 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.57 | 42.0 | 3.31e-01 | 81.4% | 91.3% |
| 3232555 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.57 | 42.0 | 3.41e-01 | 78.4% | 91.1% |
| 4994399 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.57 | 44.0 | 4.48e-01 | 84.5% | 97.9% |
| 3415703 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.56 | 44.0 | 4.49e-01 | 85.6% | 100.0% |
| 4525092 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.56 | 45.0 | 4.18e-01 | 90.7% | 98.4% |
| 4930697 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 45.0 | 4.45e-01 | 100.0% | 83.7% |
| 4874426 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.55 | 47.0 | 4.30e-01 | 95.9% | 99.2% |
| 3324580 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.55 | 39.0 | 2.92e-01 | 75.3% | 80.8% |
| 3572793 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.55 | 42.0 | 3.41e-01 | 83.5% | 72.8% |
| 4978194 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.55 | 48.0 | 4.20e-01 | 100.0% | 77.3% |
| 4021603 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 47.0 | 4.35e-01 | 100.0% | 86.9% |
| 3374695 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 38.0 | 3.67e-01 | 73.2% | 66.4% |
| 3755055 | 331.1.1.12 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 | 0.54 | 38.0 | 3.44e-01 | 74.2% | 63.0% |
| 4608994 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 4.42e-01 | 100.0% | 97.6% |
| 4314842 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 38.0 | 3.71e-01 | 74.2% | 80.0% |
| 4246300 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.53 | 40.0 | 3.23e-01 | 83.5% | 70.6% |
| 2404731 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.52 | 44.0 | 3.49e-01 | 96.9% | 75.6% |
| 3956313 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.51 | 38.0 | 3.60e-01 | 81.4% | 84.8% |
| 3650598 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 42.0 | 3.27e-01 | 94.8% | 90.8% |
| 4385244 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.51 | 36.0 | 3.65e-01 | 86.6% | 74.0% |
| 5044414 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.51 | 43.0 | 3.28e-01 | 100.0% | 82.3% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.50 | 36.0 | 3.75e-01 | 86.6% | 85.9% |