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MK759918.1__QCQ57839.1__B83_gp59__00059
Bact-VirMK759918.1__QCQ57839.1__B83_gp59__00059
Identity
- Accession:
- MK759918 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Taxonomy
TaxID: 2565501
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-76
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b3uB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.68 | 51.0 | 3.96e-01 | 81.9% | 43.9% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.68 | 58.0 | 3.47e-01 | 100.0% | 14.0% |
| 3r1kA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 49.0 | 4.08e-01 | 81.9% | 52.6% |
| 2nn6F00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.62 | 51.0 | 3.75e-01 | 95.8% | 98.7% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.62 | 55.0 | 3.33e-01 | 100.0% | 16.1% |
| 6rftA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 47.0 | 3.88e-01 | 81.9% | 50.4% |
| 2v0uA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 49.0 | 3.85e-01 | 84.7% | 93.8% |
| 6nyyE01 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.60 | 55.0 | 4.11e-01 | 100.0% | 60.7% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.60 | 45.0 | 3.75e-01 | 79.2% | 64.0% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 46.0 | 3.87e-01 | 86.1% | 54.9% |
| 2gx5C00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.60 | 48.0 | 3.74e-01 | 88.9% | 84.5% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.60 | 43.0 | 3.97e-01 | 81.9% | 58.3% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.59 | 44.0 | 3.28e-01 | 81.9% | 31.0% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 3.48e-01 | 84.7% | 78.2% |
| 2nn6C00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.59 | 52.0 | 3.51e-01 | 98.6% | 83.0% |
| 4tz7A02 | 3.30.810.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase Iibeta; Chain: A, domain 2 › 2-Layer Sandwich | 0.59 | 42.0 | 3.50e-01 | 77.8% | 94.2% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.58 | 44.0 | 3.32e-01 | 81.9% | 82.1% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 43.0 | 3.75e-01 | 84.7% | 97.5% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.56 | 46.0 | 3.44e-01 | 88.9% | 100.0% |
| 2rhqB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 42.0 | 4.02e-01 | 81.9% | 77.1% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 40.0 | 3.46e-01 | 83.3% | 51.2% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.53 | 41.0 | 3.89e-01 | 87.5% | 85.7% |
| 1qqgA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 40.0 | 3.57e-01 | 81.9% | 70.2% |
| 4oyvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 39.0 | 3.24e-01 | 84.7% | 72.5% |
| 2olsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 38.0 | 3.14e-01 | 84.7% | 70.6% |
| 2mp4A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 36.0 | 2.80e-01 | 76.4% | 66.1% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3916905 | 3567.1.1.28 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › COA8 | 0.76 | 61.0 | 4.76e-01 | 90.3% | 41.3% |
| 3580612 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.73 | 57.0 | 4.41e-01 | 83.3% | 75.5% |
| 3971859 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.73 | 55.0 | 4.75e-01 | 80.6% | 98.2% |
| 4880209 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.71 | 58.0 | 4.09e-01 | 86.1% | 56.4% |
| 3753851 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.67 | 60.0 | 3.86e-01 | 100.0% | 47.6% |
| 5078624 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.67 | 61.0 | 5.32e-01 | 100.0% | 84.8% |
| 3517822 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.65 | 50.0 | 4.29e-01 | 83.3% | 81.7% |
| 3875765 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.65 | 58.0 | 3.74e-01 | 100.0% | 48.5% |
| 5045027 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.65 | 58.0 | 4.32e-01 | 100.0% | 86.1% |
| 3425526 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.64 | 57.0 | 4.25e-01 | 98.6% | 85.2% |
| 5084047 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.64 | 53.0 | 3.64e-01 | 90.3% | 54.3% |
| 3959610 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 57.0 | 4.60e-01 | 100.0% | 92.5% |
| 3955267 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.62 | 56.0 | 4.55e-01 | 100.0% | 97.8% |
| 3222747 | 245.1.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C | 0.62 | 51.0 | 4.52e-01 | 88.9% | 87.0% |
| 4945650 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.61 | 51.0 | 4.60e-01 | 93.1% | 74.0% |
| 3626235 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.61 | 54.0 | 3.51e-01 | 100.0% | 45.5% |
| 4993017 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.60 | 48.0 | 4.37e-01 | 86.1% | 83.2% |
| 3460264 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.59 | 47.0 | 4.18e-01 | 87.5% | 65.7% |
| 387703 | 636.1.1.1 ↗ | alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › IpaB_EvcA | 0.58 | 45.0 | 3.35e-01 | 83.3% | 71.5% |
| 3280199 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 44.0 | 3.64e-01 | 86.1% | 80.0% |
| 3904472 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.58 | 38.0 | 3.34e-01 | 79.2% | 44.5% |
| 4590279 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 48.0 | 3.21e-01 | 95.8% | 50.3% |
| 3266710 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.57 | 52.0 | 5.06e-01 | 100.0% | 97.5% |
| 4173901 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 51.0 | 3.32e-01 | 100.0% | 44.9% |
| 4976198 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.57 | 44.0 | 4.27e-01 | 88.9% | 96.5% |
| 3672275 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.57 | 50.0 | 3.14e-01 | 95.8% | 55.9% |
| 3684154 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.56 | 38.0 | 3.73e-01 | 72.2% | 66.3% |
| 3320880 | 2004.1.1.299 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1995 | 0.56 | 44.0 | 2.97e-01 | 84.7% | 24.2% |
| 4057017 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 42.0 | 3.82e-01 | 84.7% | 83.8% |
| 5072002 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.55 | 46.0 | 3.80e-01 | 93.1% | 94.1% |
| 3607858 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 40.0 | 3.53e-01 | 76.4% | 74.3% |
| 3765436 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.55 | 50.0 | 3.20e-01 | 100.0% | 58.8% |
| 3902362 | 2004.1.1.81 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GBP | 0.55 | 45.0 | 3.40e-01 | 88.9% | 38.2% |
| 5072826 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.55 | 49.0 | 4.58e-01 | 100.0% | 84.3% |
| None | — | 0.55 | 39.0 | 2.63e-01 | 75.0% | 59.1% | |
| 3423296 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.54 | 40.0 | 2.72e-01 | 77.8% | 80.6% |
| 3916303 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 46.0 | 3.05e-01 | 98.6% | 71.9% |
| 3958223 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 43.0 | 3.99e-01 | 88.9% | 92.6% |
| 3535499 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 48.0 | 4.17e-01 | 97.2% | 99.1% |
| 4315296 | 5054.1.1.7 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA | 0.53 | 45.0 | 3.82e-01 | 98.6% | 91.5% |
| 3446878 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 40.0 | 3.72e-01 | 83.3% | 85.3% |
| 3957801 | 304.103.1.0 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like | 0.53 | 45.0 | 3.24e-01 | 93.1% | 41.9% |
| 3960522 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.53 | 40.0 | 3.94e-01 | 94.4% | 76.2% |
| 3959044 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.53 | 39.0 | 3.12e-01 | 80.6% | 78.7% |
| 4130418 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.53 | 39.0 | 2.65e-01 | 79.2% | 24.5% |
| 3172488 | 220.1.1.196 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SPO71 | 0.52 | 40.0 | 3.10e-01 | 83.3% | 98.1% |
| 4989036 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.51 | 39.0 | 3.71e-01 | 86.1% | 80.0% |
| 4128920 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.50 | 39.0 | 3.71e-01 | 81.9% | 88.2% |
| 5075084 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 37.0 | 3.57e-01 | 80.6% | 82.4% |