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MK764437.1__QCW20014.1__X__00008

Bact-Vir

MK764437.1__QCW20014.1__X__00008

Identity

Accession:
MK764437 ↗
Kingdom:
phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Duneviridae› Unahavirus› Flavobacterium_phage_FPSV-D15

TaxID: 2575338

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-161
PDB
Domain cluster: rep: KX620753.1__AOT24562.1__E6_33__00033__D133-219
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08797.17 best HIRAN 26.7 5.40e-06 95.7% 64.6%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k2yA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.84 79.0 7.56e-01 100.0% 90.3%
1p6vA00 2.40.280.10 Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B 0.68 60.0 5.48e-01 100.0% 80.8%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.67 39.0 4.24e-01 100.0% 69.3%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 36.0 3.10e-01 100.0% 35.3%
2l8kA00 3.30.1330.220 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha 0.65 33.0 2.98e-01 100.0% 34.1%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.59 34.0 2.71e-01 100.0% 27.7%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 38.0 3.52e-01 100.0% 49.2%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 4.00e-01 80.4% 89.7%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.84e-01 79.3% 94.1%
3k59A02 3.30.70.2250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif 0.55 27.0 3.11e-01 100.0% 61.2%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 32.0 3.41e-01 100.0% 65.8%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 38.0 3.73e-01 71.7% 96.2%
1ztmA02 1.10.287.2480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 48.0 3.79e-01 100.0% 97.0%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.72e-01 80.4% 85.6%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.33e-01 100.0% 38.0%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.51 35.0 3.73e-01 100.0% 81.2%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.51 43.0 3.82e-01 98.9% 94.4%
3k2nA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.50 41.0 3.37e-01 91.3% 95.5%
3os7A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 44.0 3.03e-01 100.0% 67.7%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3697243 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.82 73.0 6.43e-01 100.0% 66.9%
2072038 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.82 76.0 7.38e-01 100.0% 92.1%
2069093 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.82 74.0 6.53e-01 100.0% 69.8%
3330336 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.80 74.0 6.70e-01 100.0% 78.3%
3310707 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.79 74.0 6.48e-01 100.0% 72.3%
4954705 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.79 73.0 6.79e-01 97.8% 83.6%
3665217 3468.1.1.1 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN 0.77 71.0 6.13e-01 100.0% 66.4%
4952916 109.4.1.3613 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIRAN 0.77 71.0 4.88e-01 100.0% 34.2%
4990693 2.21.1.5 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.74 66.0 5.36e-01 100.0% 97.1%
4933787 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.73 66.0 5.37e-01 100.0% 97.6%
3243970 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 44.0 4.28e-01 100.0% 57.0%
4961598 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.71 63.0 5.43e-01 100.0% 94.5%
4601389 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.70 63.0 5.39e-01 100.0% 70.9%
4597943 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.69 62.0 5.36e-01 100.0% 71.0%
3971176 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 41.0 3.26e-01 100.0% 30.9%
4552630 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.69 62.0 5.58e-01 100.0% 83.2%
3195416 3468.1.1.0 ↗ a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain 0.68 62.0 5.21e-01 100.0% 72.0%
4093835 2.21.1.1 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB 0.68 61.0 5.60e-01 100.0% 85.8%
4940563 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.65 58.0 5.72e-01 100.0% 96.0%
4075460 2.1.1.272 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28196 0.64 56.0 5.64e-01 98.9% 96.8%
3570652 220.1.1.34 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.59 44.0 3.76e-01 79.3% 69.5%
3756566 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 44.0 2.98e-01 79.3% 29.8%
3258602 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 44.0 4.00e-01 79.3% 78.4%
3624517 220.1.1.34 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.59 44.0 4.01e-01 79.3% 86.4%
3237492 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 44.0 2.94e-01 79.3% 28.3%
3441542 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.58 42.0 3.84e-01 76.1% 81.6%
3244408 304.166.1.8 ↗ a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › Ig_Shg 0.58 41.0 4.64e-01 97.8% 98.6%
3183270 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 3.90e-01 79.3% 86.2%
3499463 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 42.0 2.53e-01 80.4% 15.1%
163818 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 42.0 4.03e-01 79.3% 90.7%
3414669 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 42.0 3.88e-01 79.3% 77.5%
4078826 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.77e-01 79.3% 83.1%
3496244 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.64e-01 78.3% 77.1%
3265308 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 41.0 3.54e-01 79.3% 71.0%
4945332 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.56 48.0 4.24e-01 97.8% 97.9%
3528002 11.1.1.789 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › KIAA1549 0.55 39.0 3.74e-01 100.0% 62.7%
161941 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 40.0 3.72e-01 80.4% 85.6%
3478976 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.53 46.0 4.35e-01 100.0% 88.7%
3253075 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 40.0 3.69e-01 80.4% 80.0%
3268408 2.1.1.106 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB 0.53 35.0 3.15e-01 76.1% 45.9%
3832696 1.1.11.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 0.53 37.0 3.55e-01 75.0% 98.2%
3176453 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 38.0 3.38e-01 79.3% 64.3%
4392559 3659.1.1.1 ↗ a+b two layers › MotY N-terminal domain › MotY N-terminal domain › MotY N-terminal domain › MotY_N 0.51 36.0 3.14e-01 76.1% 84.5%
137838 223.1.1.3 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.50 41.0 3.37e-01 91.3% 95.5%
D2 medium residues 1-66
PDB