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MK764442.1__QCW20339.1__X__00015

Bact-Vir

MK764442.1__QCW20339.1__X__00015

Identity

Accession:
MK764442 ↗
Kingdom:
phage

Quality

73.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Winoviridae› Flavobacterium_phage_FPSV-S1

TaxID: 2575345

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 58-155
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.78 44.0 4.83e-01 74.5% 67.5%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.75 38.0 3.11e-01 86.7% 27.5%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.71 43.0 4.55e-01 76.5% 68.2%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.65 48.0 4.52e-01 77.6% 100.0%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.64 36.0 2.89e-01 77.6% 29.7%
4n81A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.64 40.0 3.58e-01 80.6% 45.6%
3lv0A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.63 40.0 3.56e-01 80.6% 45.3%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.62 40.0 3.42e-01 84.7% 40.9%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.61 36.0 2.94e-01 93.9% 30.9%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 43.0 3.81e-01 79.6% 51.1%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 42.0 3.69e-01 71.4% 90.1%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.59 43.0 4.25e-01 83.7% 71.4%
2fkiA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.59 42.0 3.96e-01 80.6% 61.9%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.59 41.0 3.57e-01 82.7% 47.1%
2y3vD00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.59 42.0 3.68e-01 76.5% 94.8%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.57 43.0 3.83e-01 80.6% 100.0%
7zqiA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.55 33.0 2.72e-01 79.6% 32.6%
2q74A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.55 43.0 3.87e-01 81.6% 96.1%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.96e-01 92.9% 40.8%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.54 41.0 3.64e-01 80.6% 56.5%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.44e-01 77.6% 90.8%
1e5tA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 43.0 2.94e-01 89.8% 47.6%
3sluA02 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.39e-01 76.5% 70.8%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.08e-01 98.0% 67.4%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 37.0 2.74e-01 78.6% 70.0%
1mpxA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 2.87e-01 82.7% 59.4%
3o6uC00 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.51 36.0 3.37e-01 72.4% 72.3%
1wlgA02 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.50 38.0 3.37e-01 78.6% 63.6%
4adiA02 3.30.67.20 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Rubella membrane glycoprotein E1, domain 2 0.50 36.0 3.83e-01 75.5% 95.5%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2756455 9.11.1.0 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.78 48.0 5.02e-01 78.6% 67.4%
3572103 220.1.1.74 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.73 43.0 3.83e-01 78.6% 42.2%
3957265 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.71 31.0 3.54e-01 91.8% 53.3%
3433185 1094.1.1.0 ↗ a/b three-layered sandwiches › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain 0.67 46.0 3.63e-01 99.0% 34.1%
4419937 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.66 40.0 4.29e-01 80.6% 70.6%
5072132 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.65 35.0 3.90e-01 75.5% 65.0%
3263815 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 35.0 3.67e-01 76.5% 60.0%
3916127 233.1.1.0 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.63 36.0 2.87e-01 76.5% 30.6%
4979253 241.9.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 0.62 38.0 3.68e-01 80.6% 55.5%
4014180 708.1.2.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like 0.61 36.0 3.37e-01 71.4% 47.5%
4386515 330.1.1.30 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 0.60 33.0 4.07e-01 75.5% 83.1%
4875201 3338.1.1.1 ↗ a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm 0.60 42.0 3.77e-01 82.7% 52.2%
3773523 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.59 36.0 3.08e-01 76.5% 38.7%
6642 241.11.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.59 42.0 3.96e-01 80.6% 61.9%
4338928 233.1.1.6 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.59 34.0 3.56e-01 76.5% 62.2%
3925444 5087.3.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C 0.59 49.0 3.87e-01 91.8% 51.2%
3594594 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 41.0 3.74e-01 77.6% 54.6%
3512363 3794.1.1.1 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › PCC_BT 0.58 38.0 3.29e-01 74.5% 44.1%
4977574 241.11.1.7 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › DUF3788 0.58 45.0 4.05e-01 80.6% 64.6%
3941694 241.11.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.58 40.0 3.90e-01 78.6% 64.5%
4024069 101.1.12.3 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.58 42.0 3.62e-01 77.6% 87.5%
3337354 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.57 43.0 3.92e-01 78.6% 94.6%
5080369 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.57 40.0 4.06e-01 73.5% 73.7%
3843835 233.1.1.6 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_3 0.57 36.0 2.89e-01 76.5% 33.2%
5057041 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.56 38.0 4.02e-01 74.5% 78.4%
4977352 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.55 41.0 4.03e-01 76.5% 74.8%
3620886 5.1.4.34 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.55 47.0 3.06e-01 95.9% 56.2%
3265309 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.55 47.0 4.08e-01 91.8% 79.9%
3178905 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.55 38.0 3.27e-01 70.4% 80.4%
3863169 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.54 35.0 2.84e-01 79.6% 36.0%
5042489 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.53 37.0 3.85e-01 75.5% 75.5%
3978651 241.13.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif 0.53 40.0 3.93e-01 79.6% 91.4%
4836497 233.1.1.1 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.53 31.0 2.58e-01 79.6% 32.4%
5000916 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.52 36.0 3.63e-01 72.4% 70.0%
4970858 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 34.0 3.32e-01 77.6% 60.0%
3432175 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.52 40.0 3.38e-01 81.6% 72.8%
3831725 7579.1.1.42 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.51 43.0 3.10e-01 91.8% 65.7%
4114338 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.51 36.0 3.74e-01 76.5% 80.0%
5029382 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.50 36.0 3.79e-01 75.5% 82.2%
3759651 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.50 31.0 3.21e-01 91.8% 66.7%