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MK764449.1__QCW20737.1__X__00080

Bact-Vir

MK764449.1__QCW20737.1__X__00080

Identity

Accession:
MK764449 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-105
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01541.31 best GIY-YIG 26.7 7.80e-06 92.9% 92.3%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ln0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.81 71.0 7.32e-01 98.0% 98.9%
7rd0A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.52 32.0 2.80e-01 94.9% 38.1%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.51 38.0 3.55e-01 79.6% 96.9%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 42.0 4.02e-01 91.8% 85.6%
3ig5A02 3.30.590.50 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › 0.51 45.0 3.08e-01 100.0% 39.7%
4c23B02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 35.0 2.75e-01 74.5% 77.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
77927 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.82 73.0 7.44e-01 99.0% 97.9%
3963488 821.1.1.7 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG 0.82 75.0 7.12e-01 100.0% 84.3%
3226334 821.1.1.7 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG 0.81 76.0 5.97e-01 100.0% 59.5%
3622050 821.1.1.7 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › LEM-3_GIY-YIG 0.80 75.0 5.85e-01 100.0% 57.9%
D2 high residues 163-227
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w07A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.53 36.0 3.06e-01 72.3% 72.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 34.0 3.84e-01 73.8% 100.0%
2760149 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.51 37.0 3.36e-01 78.5% 56.5%
4090010 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.50 36.0 3.81e-01 78.5% 89.1%
4940578 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.50 35.0 3.38e-01 89.2% 62.5%