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MK764450.1__QCW20772.1__X__00023
Bact-VirMK764450.1__QCW20772.1__X__00023
Identity
- Accession:
- MK764450 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Taxonomy
TaxID: 2575342
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-61
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.74 | 45.0 | 4.20e-01 | 75.4% | 50.7% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.74 | 45.0 | 3.80e-01 | 75.4% | 38.5% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.74 | 45.0 | 3.72e-01 | 75.4% | 36.1% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 45.0 | 3.85e-01 | 75.4% | 39.3% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 43.0 | 4.02e-01 | 73.7% | 47.9% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.72 | 49.0 | 3.22e-01 | 75.4% | 17.0% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.71 | 45.0 | 4.29e-01 | 75.4% | 54.4% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 44.0 | 3.67e-01 | 75.4% | 38.3% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.68 | 46.0 | 3.05e-01 | 75.4% | 17.1% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.67 | 48.0 | 3.24e-01 | 75.4% | 24.4% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.67 | 43.0 | 3.10e-01 | 77.2% | 22.7% |
| 1vwxB03 | 3.30.1430.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › | 0.67 | 51.0 | 3.95e-01 | 82.5% | 92.7% |
| 3ci0I00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.67 | 44.0 | 3.95e-01 | 75.4% | 47.0% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 48.0 | 3.86e-01 | 78.9% | 40.4% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.64 | 49.0 | 3.58e-01 | 82.5% | 69.7% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 41.0 | 3.70e-01 | 77.2% | 45.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 39.0 | 3.20e-01 | 75.4% | 32.1% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 52.0 | 3.38e-01 | 100.0% | 98.4% |
| 3wmyA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 42.0 | 2.67e-01 | 80.7% | 13.6% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 52.0 | 3.20e-01 | 96.5% | 86.6% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 45.0 | 4.38e-01 | 78.9% | 73.0% |
| 3o2zF00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 45.0 | 4.08e-01 | 78.9% | 92.2% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 46.0 | 4.30e-01 | 100.0% | 66.2% |
| 3os7A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 42.0 | 2.62e-01 | 73.7% | 13.4% |
| 2qmqA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 43.0 | 2.78e-01 | 77.2% | 27.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 4.18e-01 | 96.5% | 96.2% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.60 | 43.0 | 3.23e-01 | 77.2% | 33.1% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 42.0 | 3.40e-01 | 100.0% | 38.9% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 42.0 | 3.64e-01 | 75.4% | 77.4% |
| 2p8tA02 | 3.30.1360.30 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain | 0.59 | 42.0 | 3.49e-01 | 77.2% | 83.5% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 2.95e-01 | 75.4% | 24.0% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.57 | 49.0 | 3.66e-01 | 100.0% | 100.0% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 39.0 | 2.53e-01 | 75.4% | 28.8% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 37.0 | 2.82e-01 | 75.4% | 27.0% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.60e-01 | 78.9% | 85.0% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 39.0 | 2.57e-01 | 80.7% | 27.1% |
| 2eefA01 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.53 | 46.0 | 3.60e-01 | 100.0% | 59.1% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 46.0 | 2.94e-01 | 100.0% | 95.0% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.53 | 37.0 | 3.06e-01 | 75.4% | 75.5% |
| 3ff2A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.05e-01 | 78.9% | 40.2% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 35.0 | 2.67e-01 | 73.7% | 24.9% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.52 | 38.0 | 3.00e-01 | 84.2% | 89.3% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 43.0 | 3.52e-01 | 100.0% | 63.3% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 42.0 | 2.81e-01 | 100.0% | 70.0% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 44.0 | 3.55e-01 | 98.2% | 59.3% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.52 | 44.0 | 3.61e-01 | 98.2% | 97.3% |
| 2g1dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 35.0 | 3.10e-01 | 75.4% | 74.5% |
| 5cqfA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.58e-01 | 94.7% | 23.6% |
| 3a0rA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 34.0 | 2.92e-01 | 73.7% | 38.7% |
| 3mgdB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 35.0 | 2.70e-01 | 75.4% | 32.2% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3390564 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.75 | 45.0 | 3.66e-01 | 75.4% | 33.3% |
| 4260316 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 45.0 | 4.00e-01 | 75.4% | 45.0% |
| 3911301 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.73 | 44.0 | 3.87e-01 | 75.4% | 41.2% |
| 4040354 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.72 | 46.0 | 4.21e-01 | 75.4% | 49.3% |
| 3217597 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.71 | 52.0 | 3.06e-01 | 78.9% | 86.8% |
| 3493131 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 42.0 | 3.43e-01 | 75.4% | 36.0% |
| 3608810 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 47.0 | 4.04e-01 | 77.2% | 87.8% |
| 3416830 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.65 | 48.0 | 3.20e-01 | 78.9% | 21.3% |
| 5053192 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 46.0 | 3.54e-01 | 77.2% | 36.6% |
| 3599571 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 47.0 | 3.82e-01 | 80.7% | 43.5% |
| 4951146 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.64 | 45.0 | 3.06e-01 | 75.4% | 22.9% |
| 4196590 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.64 | 50.0 | 3.07e-01 | 100.0% | 14.2% |
| 3929989 | 330.16.1.2 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP | 0.63 | 47.0 | 4.15e-01 | 80.7% | 90.6% |
| 3957335 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.63 | 41.0 | 3.30e-01 | 71.9% | 33.0% |
| 3591306 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 45.0 | 4.18e-01 | 75.4% | 68.6% |
| 3440368 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 43.0 | 2.64e-01 | 73.7% | 14.9% |
| 4978813 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 45.0 | 3.93e-01 | 78.9% | 73.3% |
| 3204704 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.62 | 51.0 | 2.97e-01 | 94.7% | 66.4% |
| 3297925 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 42.0 | 4.20e-01 | 73.7% | 68.3% |
| 3173730 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.61 | 44.0 | 3.18e-01 | 75.4% | 31.0% |
| 4282790 | 3480.1.1.0 ↗ | a+b duplicates or obligate multimers › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain | 0.61 | 45.0 | 3.62e-01 | 78.9% | 43.1% |
| 3528669 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.60 | 41.0 | 3.40e-01 | 70.2% | 39.8% |
| 3635930 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 44.0 | 3.32e-01 | 80.7% | 30.3% |
| 3991175 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 41.0 | 4.21e-01 | 71.9% | 94.5% |
| 4017266 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.60 | 45.0 | 3.17e-01 | 82.5% | 35.9% |
| 3581140 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 41.0 | 2.64e-01 | 75.4% | 14.2% |
| 3689454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 44.0 | 3.59e-01 | 82.5% | 81.8% |
| 3229636 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.58 | 47.0 | 3.35e-01 | 93.0% | 76.8% |
| 3523220 | 395.1.1.1 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › PTN_MK_C | 0.58 | 41.0 | 4.29e-01 | 77.2% | 86.0% |
| 5025383 | 304.165.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › Ta1207 | 0.58 | 49.0 | 3.68e-01 | 100.0% | 70.3% |
| 3518935 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 44.0 | 2.78e-01 | 87.7% | 35.7% |
| 3814098 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.57 | 49.0 | 4.15e-01 | 93.0% | 58.9% |
| 3770803 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.57 | 50.0 | 3.97e-01 | 96.5% | 58.2% |
| 3587514 | 243.1.1.17 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TpcC | 0.57 | 48.0 | 3.70e-01 | 100.0% | 41.5% |
| 3629665 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.57 | 41.0 | 4.32e-01 | 78.9% | 93.9% |
| 3842363 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.57 | 49.0 | 3.95e-01 | 96.5% | 58.2% |
| 3460699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 48.0 | 4.17e-01 | 96.5% | 63.5% |
| 2773776 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 35.0 | 3.71e-01 | 70.2% | 80.4% |
| 3786395 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.77e-01 | 96.5% | 23.8% |
| 3215160 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.53 | 38.0 | 4.02e-01 | 78.9% | 95.9% |
| 3610536 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 37.0 | 2.51e-01 | 82.5% | 35.9% |
| 4029521 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 43.0 | 3.18e-01 | 100.0% | 42.3% |
| 4029724 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.52 | 43.0 | 3.31e-01 | 100.0% | 49.7% |
| 3246291 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 45.0 | 3.53e-01 | 100.0% | 45.2% |
| 3620306 | 327.11.2.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_10 | 0.51 | 39.0 | 3.26e-01 | 91.2% | 84.2% |
| 3732126 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.50 | 41.0 | 3.28e-01 | 100.0% | 64.4% |
| 3761115 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 41.0 | 2.53e-01 | 100.0% | 77.2% |