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MK770119.1__QCW23832.1__AAS21_gp094__00094

Bact-Vir

MK770119.1__QCW23832.1__AAS21_gp094__00094

Identity

Accession:
MK770119 ↗
Kingdom:
phage

Quality

85.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-45
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.86 75.0 5.89e-01 100.0% 50.0%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.81 68.0 6.99e-01 97.7% 100.0%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.79 68.0 5.35e-01 97.7% 49.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 5.72e-01 100.0% 70.4%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 64.0 5.36e-01 100.0% 52.6%
2f4lA03 3.10.28.20 Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains 0.78 64.0 5.11e-01 88.4% 58.7%
2bpoA04 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.76 66.0 4.35e-01 93.0% 31.5%
4xaxB02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.76 63.0 4.86e-01 95.3% 94.9%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.76 67.0 5.66e-01 97.7% 65.2%
1vdlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.74 53.0 4.33e-01 76.7% 43.8%
2vk9A03 1.10.3730.30 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › 0.74 50.0 3.89e-01 72.1% 36.7%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 61.0 5.67e-01 100.0% 94.8%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.73 62.0 4.08e-01 97.7% 74.6%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.58e-01 100.0% 77.8%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 56.0 5.49e-01 93.0% 81.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.72 59.0 4.67e-01 100.0% 43.6%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.72 59.0 4.13e-01 97.7% 83.4%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.72 58.0 3.94e-01 90.7% 74.8%
3fmcC01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.70 58.0 3.58e-01 100.0% 41.0%
1k78I00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.48e-01 100.0% 79.3%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 56.0 5.51e-01 100.0% 89.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 53.0 5.17e-01 100.0% 77.1%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 56.0 4.94e-01 100.0% 59.2%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.04e-01 97.7% 83.8%
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.69 57.0 4.64e-01 100.0% 69.1%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 55.0 4.60e-01 93.0% 65.8%
1uhsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 56.0 5.31e-01 100.0% 79.6%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 4.87e-01 100.0% 60.0%
2dhyA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.68 46.0 4.09e-01 72.1% 47.8%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.41e-01 100.0% 89.6%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 53.0 5.26e-01 100.0% 89.4%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 5.20e-01 100.0% 79.2%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.67 55.0 4.79e-01 100.0% 69.9%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 57.0 5.08e-01 100.0% 75.8%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 53.0 4.77e-01 100.0% 61.8%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 5.26e-01 100.0% 95.7%
3tbiA00 1.10.10.2850 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phage late-transcription coactivator-like 0.66 52.0 4.65e-01 100.0% 66.2%
2k89A00 3.10.20.870 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain 0.66 52.0 4.47e-01 100.0% 61.3%
5kbwB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.65 53.0 3.66e-01 100.0% 68.4%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 46.0 3.33e-01 81.4% 25.2%
2mw8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 52.0 4.70e-01 100.0% 64.2%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.42e-01 83.7% 67.2%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 52.0 4.66e-01 100.0% 70.1%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 50.0 3.73e-01 100.0% 38.3%
1n0uA06 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.61 49.0 3.46e-01 100.0% 43.4%
1miwA03 1.20.58.560 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 50.0 3.94e-01 95.3% 46.0%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 51.0 4.40e-01 100.0% 86.5%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 51.0 4.54e-01 100.0% 64.2%
3kd3A02 1.10.150.210 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 0.59 41.0 3.76e-01 83.7% 53.3%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.58 46.0 3.93e-01 93.0% 69.3%
3mabA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 45.0 3.86e-01 100.0% 60.0%
3k7dA03 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 45.0 3.34e-01 95.3% 97.0%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033200 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 72.0 7.13e-01 81.4% 77.8%
4999433 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.93 81.0 7.68e-01 95.3% 86.0%
4944767 101.1.2.883 alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.90 81.0 6.65e-01 100.0% 60.0%
4379527 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.89 78.0 6.17e-01 97.7% 51.8%
5082787 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.88 77.0 5.83e-01 100.0% 45.0%
4406214 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.87 75.0 5.80e-01 97.7% 47.3%
4928641 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.87 76.0 6.28e-01 97.7% 58.7%
5004914 101.35.1.40 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF1699 0.86 73.0 6.70e-01 97.7% 77.6%
3277622 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.86 76.0 4.32e-01 97.7% 11.1%
4972388 101.1.2.949 alpha arrays › HTH › HTH › winged helix domain › PF28863 0.86 76.0 4.86e-01 100.0% 22.2%
5019592 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.85 73.0 4.57e-01 100.0% 19.6%
4933326 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.85 73.0 5.76e-01 97.7% 48.9%
4995680 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.85 75.0 6.70e-01 100.0% 85.0%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 72.0 6.18e-01 100.0% 64.3%
3662725 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.84 71.0 6.67e-01 100.0% 81.8%
5001937 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 74.0 6.82e-01 100.0% 81.8%
4025313 3721.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 0.83 57.0 4.80e-01 72.1% 57.1%
4971669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 4.94e-01 100.0% 31.7%
3704050 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 6.47e-01 93.0% 86.0%
5058906 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 70.0 5.76e-01 97.7% 63.7%
4224260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 72.0 5.57e-01 100.0% 45.3%
4941656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 5.90e-01 100.0% 61.3%
3281058 101.35.1.10 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF4287 0.81 69.0 6.28e-01 100.0% 71.7%
3714703 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.81 56.0 4.26e-01 93.0% 32.0%
4979355 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 69.0 5.14e-01 100.0% 42.7%
4001884 102.1.1.8 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › BAF 0.80 67.0 5.60e-01 100.0% 78.8%
4073499 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.79 66.0 6.84e-01 97.7% 100.0%
3636418 2003.1.1.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA 0.77 66.0 3.97e-01 97.7% 37.9%
3243507 101.1.1.289 alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB 0.76 64.0 5.73e-01 100.0% 70.8%
3341091 101.35.1.6 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 0.76 63.0 5.63e-01 100.0% 64.6%
1169399 101.35.1.2 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp 0.75 63.0 6.05e-01 100.0% 84.6%
5024512 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 65.0 6.23e-01 100.0% 86.0%
2077327 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.74 61.0 4.91e-01 100.0% 47.9%
3924903 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 5.47e-01 100.0% 75.4%
4934674 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 4.28e-01 100.0% 46.7%
3970291 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.73 60.0 6.03e-01 100.0% 97.8%
5079733 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.19e-01 100.0% 58.7%
5074546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 4.91e-01 100.0% 51.8%
3571378 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 56.0 5.59e-01 100.0% 91.1%
4983598 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.25e-01 100.0% 83.1%
3890613 101.1.2.698 alpha arrays › HTH › HTH › winged helix domain › PF27079 0.71 59.0 5.30e-01 100.0% 67.7%
4928271 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.82e-01 93.0% 100.0%
3243458 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 57.0 5.01e-01 100.0% 60.0%
2556 101.1.1.43 alpha arrays › HTH › HTH › Three-helical HTH › Mor 0.70 53.0 5.17e-01 100.0% 77.1%
3886164 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 57.0 5.56e-01 100.0% 90.0%
3878549 101.1.2.536 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.69 57.0 5.37e-01 100.0% 81.8%
3996572 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 54.0 5.40e-01 95.3% 88.9%
3887965 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.69 57.0 5.37e-01 100.0% 81.8%
3893980 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 55.0 5.07e-01 100.0% 70.0%
3330562 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 4.90e-01 100.0% 64.0%
1282560 101.1.1.55 alpha arrays › HTH › HTH › Three-helical HTH › Homez 0.68 55.0 5.17e-01 100.0% 73.7%
3227458 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 55.0 5.08e-01 100.0% 83.3%
3994528 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 52.0 4.84e-01 100.0% 68.3%
3229130 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 53.0 5.18e-01 100.0% 84.0%
3899987 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.67 55.0 4.55e-01 100.0% 55.3%
3538312 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 55.0 5.29e-01 100.0% 84.0%
3768463 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 53.0 4.97e-01 100.0% 73.3%
3525151 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 53.0 5.34e-01 100.0% 97.8%
3572716 101.1.1.55 alpha arrays › HTH › HTH › Three-helical HTH › Homez 0.66 53.0 5.31e-01 100.0% 93.3%
3979215 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 54.0 5.14e-01 100.0% 92.7%
3751123 102.4.1.0 alpha arrays › HhH/H2TH › YozE-like › YozE-like 0.64 53.0 4.66e-01 100.0% 62.9%
4200824 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.64 54.0 5.07e-01 100.0% 76.4%
3787573 1106.1.1.1 alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 0.63 46.0 3.95e-01 81.4% 52.1%
3205840 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 47.0 4.84e-01 95.3% 100.0%
3311171 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.55 42.0 2.74e-01 86.0% 42.9%