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MK770119.1__QCW23864.1__AAS21_gp126__00126

Bact-Vir

MK770119.1__QCW23864.1__AAS21_gp126__00126

Identity

Accession:
MK770119 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-96
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.77 70.0 5.82e-01 100.0% 88.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.71 53.0 4.41e-01 79.5% 98.7%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.70 49.0 4.16e-01 72.7% 57.6%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.67 51.0 3.55e-01 80.7% 80.2%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.67 43.0 4.99e-01 87.5% 92.1%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.66 52.0 5.39e-01 88.6% 92.5%
6f90A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 50.0 3.49e-01 80.7% 77.1%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.65 49.0 3.91e-01 80.7% 71.7%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 49.0 3.56e-01 80.7% 84.4%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 44.0 2.99e-01 70.5% 38.7%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.64 47.0 4.21e-01 78.4% 75.0%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.63 48.0 4.06e-01 81.8% 99.3%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.63 53.0 4.79e-01 90.9% 86.4%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.62 52.0 5.26e-01 100.0% 94.2%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.62 52.0 4.20e-01 94.3% 67.2%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.61 50.0 4.00e-01 90.9% 67.6%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 51.0 4.65e-01 89.8% 84.2%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.60 46.0 4.42e-01 81.8% 93.1%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.60 43.0 3.70e-01 73.9% 87.1%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 47.0 3.88e-01 84.1% 90.0%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 49.0 4.00e-01 92.0% 70.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.60 46.0 4.67e-01 89.8% 82.0%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 41.0 4.23e-01 70.5% 78.0%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 42.0 3.42e-01 76.1% 87.4%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 46.0 3.92e-01 83.0% 98.6%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.59 46.0 3.65e-01 85.2% 67.4%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.58 37.0 4.32e-01 80.7% 93.3%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.58 51.0 4.25e-01 98.9% 75.2%
2wvxA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 49.0 3.43e-01 94.3% 85.3%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.57 39.0 3.37e-01 70.5% 88.8%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 49.0 3.58e-01 94.3% 73.8%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 44.0 3.37e-01 83.0% 86.4%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 42.0 3.66e-01 78.4% 50.7%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.56 49.0 4.72e-01 100.0% 95.1%
2wcoA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.56 42.0 3.89e-01 80.7% 80.0%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 47.0 4.13e-01 95.5% 64.4%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.55 45.0 4.14e-01 88.6% 73.0%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.55 42.0 3.87e-01 80.7% 96.5%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 42.0 2.94e-01 86.4% 97.5%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.65e-01 88.6% 90.7%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.54 39.0 3.65e-01 76.1% 90.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 39.0 3.57e-01 84.1% 56.7%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 43.0 3.82e-01 95.5% 72.7%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 39.0 2.86e-01 79.5% 37.1%
2xepB02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 45.0 3.30e-01 100.0% 68.0%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.59e-01 90.9% 83.7%
2fe0A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 38.0 3.61e-01 79.5% 74.8%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3179848 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.76 67.0 5.72e-01 96.6% 86.3%
5061240 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.72 64.0 5.55e-01 100.0% 97.1%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.72 50.0 5.21e-01 72.7% 97.5%
5059660 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.71 65.0 5.50e-01 100.0% 95.0%
5042979 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.71 63.0 5.32e-01 100.0% 92.7%
3625247 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.70 62.0 5.77e-01 100.0% 92.7%
3601982 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 49.0 3.17e-01 72.7% 51.9%
3715886 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 48.0 3.12e-01 71.6% 49.5%
3546306 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.67 46.0 4.47e-01 75.0% 64.2%
3279781 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.67 51.0 3.80e-01 80.7% 89.1%
2328237 12.3.1.28 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N 0.67 51.0 3.65e-01 80.7% 87.7%
4964031 7089.1.1.7 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 0.67 48.0 5.26e-01 75.0% 98.6%
3695635 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 47.0 4.70e-01 72.7% 91.1%
4947620 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 50.0 3.72e-01 80.7% 96.3%
3692244 5.1.4.436 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, PQQ_2, Beta-prop_EMC1_N 0.66 49.0 2.79e-01 78.4% 36.7%
3250134 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 50.0 4.52e-01 81.8% 96.7%
2328228 12.3.1.28 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N 0.65 50.0 3.59e-01 80.7% 86.7%
3499502 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 46.0 2.91e-01 72.7% 36.2%
2900289 12.3.1.28 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N 0.65 49.0 3.61e-01 80.7% 88.4%
2547893 12.3.1.28 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N 0.64 49.0 3.63e-01 80.7% 86.8%
4090939 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 51.0 5.33e-01 96.6% 95.0%
3416070 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 46.0 3.04e-01 76.1% 36.6%
4292366 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.63 47.0 3.79e-01 80.7% 92.4%
3803056 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 45.0 3.19e-01 77.3% 81.9%
3631990 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.61 52.0 4.27e-01 94.3% 72.7%
3801954 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 42.0 2.83e-01 71.6% 27.4%
3606615 241.10.1.0 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.61 50.0 5.05e-01 90.9% 91.1%
3752441 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.61 53.0 4.85e-01 100.0% 90.8%
5052406 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.61 47.0 3.74e-01 83.0% 92.2%
3829527 220.1.1.153 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 0.60 43.0 3.67e-01 76.1% 69.7%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.60 48.0 4.26e-01 87.5% 63.8%
3645476 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.60 43.0 4.16e-01 75.0% 78.0%
None 0.60 52.0 4.51e-01 98.9% 70.7%
4000493 6129.1.1.9 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C 0.59 43.0 3.40e-01 100.0% 37.7%
3585692 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.59 51.0 4.38e-01 100.0% 71.3%
3890948 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 43.0 2.77e-01 76.1% 28.6%
3430171 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 47.0 3.09e-01 90.9% 21.3%
3910253 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.58 50.0 4.80e-01 100.0% 100.0%
4259150 295.1.1.46 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › WapI 0.58 42.0 3.65e-01 76.1% 87.4%
3284176 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 47.0 4.23e-01 87.5% 79.2%
3415735 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.58 46.0 4.59e-01 92.0% 100.0%
3781326 868.1.1.8 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C 0.57 48.0 3.27e-01 89.8% 99.0%
3167601 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.57 44.0 4.37e-01 86.4% 100.0%
4978135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 41.0 3.55e-01 77.3% 49.0%
None 0.57 47.0 4.36e-01 96.6% 85.8%
3331262 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.57 45.0 4.47e-01 90.9% 100.0%
4027123 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 48.0 3.23e-01 97.7% 99.5%
3929502 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 45.0 4.49e-01 89.8% 81.9%
3793430 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 43.0 4.23e-01 83.0% 92.6%
4949939 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 41.0 3.53e-01 78.4% 48.3%
4161565 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.56 48.0 4.70e-01 96.6% 96.8%
3821077 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 40.0 2.68e-01 76.1% 20.5%
3282063 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.56 47.0 4.22e-01 95.5% 83.2%
4265925 3518.1.2.0 a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex 0.55 43.0 3.67e-01 86.4% 70.5%
4019954 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.54 46.0 3.08e-01 95.5% 77.0%
3600669 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.54 46.0 4.19e-01 95.5% 91.7%
4015773 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.54 43.0 4.21e-01 92.0% 100.0%
None 0.54 41.0 4.16e-01 84.1% 100.0%
4825040 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.53 39.0 3.32e-01 76.1% 84.5%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.53 40.0 4.14e-01 83.0% 95.3%
3926705 6129.1.1.9 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C 0.53 43.0 3.40e-01 87.5% 59.4%
3513651 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.51 39.0 3.73e-01 85.2% 68.2%
3482455 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 44.0 3.35e-01 96.6% 57.1%
4960403 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 38.0 3.81e-01 81.8% 88.9%
D2 medium residues 103-184
PDB